Paenibacillus sp. YPG26: LDO05_08205
Help
Entry
LDO05_08205 CDS
T11186
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00300
Lysine biosynthesis
payg00470
D-Amino acid metabolism
payg01100
Metabolic pathways
payg01110
Biosynthesis of secondary metabolites
payg01120
Microbial metabolism in diverse environments
payg01230
Biosynthesis of amino acids
Module
payg_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
payg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LDO05_08205 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDO05_08205 (lysA)
Enzymes [BR:
payg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LDO05_08205 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
USB34723
LinkDB
All DBs
Position
1747787..1749118
Genome browser
AA seq
443 aa
AA seq
DB search
MFLHGTSTINTQGHLEIGGCDTVELKEKYGTPLYIVDEALVRQRSREYVEAFKQSGLSFQ
VAYASKAFCTLAMCRLAEEEGLSLDVVSEGELYTALQAGFPVGRIHFHGNNKTPEEIQMA
ITAGIGCFVVDNFTEIHLLNAIAKENDARVNVLLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGSAFEAVKLASEQSNLNLLGVHSHIGSQIFEVEGFQMAVERVAAFAKSVKEQLNVIF
QVVNLGGGFGIRYMEEDTPLKISEYVKAITDGVKQHFTGTYDKLPEIWVEPGRSIVGDAG
TTLYTVGTTKDIPGVRKYVAVDGGMTDNPRPALYESKYEAMLANRGNDQSEETVSIAGKC
CESGDMLIWDLDLPKVSSGDLLAVSCTGAYNYAMASNYNRIRRPAVVFVKDGASDLVVKR
ETLNDIVANDLIPERIQKQPSFN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttctacacggtacaagcacaatcaatacacaaggacacctcgaaattggaggctgt
gatacagtagagctcaaagagaaatatggaacacccttatatattgttgacgaggcgcta
gttcgtcagcggagccgcgaatatgtggaagcctttaagcaatccggactttctttccag
gttgcctatgcgagcaaagcgttctgtacgctggccatgtgccgattggcagaggaagaa
gggctctctctggatgttgtatctgaaggagagctctacacagcactgcaggctggattc
ccagtaggaagaattcacttccacgggaataacaagacgcctgaagagattcagatggcg
attacagcggggattggttgttttgttgttgataatttcaccgagattcatctgctgaat
gcgattgctaaggagaatgatgcccgggttaacgtactgcttcgtgttactccaggggta
gaagcccatacgcatgaatatatttccacgggtcagacagactccaagtttggattcgat
attggaaatggctcggcatttgaagctgtgaagctggcaagcgagcagtccaatctgaat
ctgctgggcgttcattcccatatcggctcccaaatctttgaggtggaaggcttccagatg
gcggttgagcgcgttgccgcttttgccaaatccgtaaaagagcagctgaatgtgatcttc
caggttgtgaacctgggcggcggcttcggaatccgttatatggaagaagataccccgctt
aagatttccgagtatgttaaagccattacagatggcgtgaagcagcattttaccggaacc
tatgacaagcttcctgaaatctgggttgagccaggccggagtattgtcggggatgcgggc
acaaccttgtatacggtcggtacaactaaggacattccgggcgtgcgcaaatatgtggct
gtagacggaggtatgaccgataaccctcgtccggcgctgtatgagtcgaaatatgaagct
atgctggcgaaccgcgggaacgatcagtcggaagagacagtatctattgcaggcaaatgc
tgcgagagcggagatatgctgatttgggatttggatctgccaaaagtaagcagcggcgat
ctcctggcagtctcctgcacaggtgcatataactatgccatggcaagcaactataaccgg
attcgcagaccagcagtggtcttcgtgaaggacggggcaagtgatctcgtggtgaagaga
gagactctgaatgatatcgttgccaatgatctgattcctgagcggatccagaagcagcct
tcatttaactaa
DBGET
integrated database retrieval system