Paenibacillus sp. YPG26: LDO05_09310
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Entry
LDO05_09310 CDS
T11186
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00010
Glycolysis / Gluconeogenesis
payg00020
Citrate cycle (TCA cycle)
payg00260
Glycine, serine and threonine metabolism
payg00280
Valine, leucine and isoleucine degradation
payg00310
Lysine degradation
payg00380
Tryptophan metabolism
payg00620
Pyruvate metabolism
payg00630
Glyoxylate and dicarboxylate metabolism
payg00640
Propanoate metabolism
payg00670
One carbon pool by folate
payg00785
Lipoic acid metabolism
payg01100
Metabolic pathways
payg01110
Biosynthesis of secondary metabolites
payg01120
Microbial metabolism in diverse environments
payg01200
Carbon metabolism
payg01210
2-Oxocarboxylic acid metabolism
payg01240
Biosynthesis of cofactors
Module
payg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
payg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
payg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LDO05_09310 (lpdA)
00020 Citrate cycle (TCA cycle)
LDO05_09310 (lpdA)
00620 Pyruvate metabolism
LDO05_09310 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LDO05_09310 (lpdA)
00640 Propanoate metabolism
LDO05_09310 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LDO05_09310 (lpdA)
00280 Valine, leucine and isoleucine degradation
LDO05_09310 (lpdA)
00310 Lysine degradation
LDO05_09310 (lpdA)
00380 Tryptophan metabolism
LDO05_09310 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LDO05_09310 (lpdA)
00670 One carbon pool by folate
LDO05_09310 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
payg04147
]
LDO05_09310 (lpdA)
Enzymes [BR:
payg01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LDO05_09310 (lpdA)
Exosome [BR:
payg04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LDO05_09310 (lpdA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
FAD_binding_3
FAD_oxidored
FAD_binding_2
HI0933_like
Pyr_redox_3
DAO
UDPG_MGDP_dh_N
AlaDh_PNT_C
NAD_binding_8
3HCDH_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
USB34924
LinkDB
All DBs
Position
1968533..1969948
Genome browser
AA seq
471 aa
AA seq
DB search
MVVGDASLDIDTLVVGAGPGGYVAAIRAAQLGQKVIIVDKSELGGVCLNRGCIPSKALIS
AAHQYEAAKHGEAFGISADNVKVDFSKTQAFKNGVVKKMTQGVGGLLKGNKVEVFSGEVM
FINENEARAFNDHESPRYRFKHCILATGSRPIELKPFPFGGRILSSTEALQLEEIPSSLV
VIGGGYIGAELGQMFSKFGTKVTIIEGLDTVLPGFDKDMTRLVAKSMEKTGIEIVTNAKA
ESAEQTDKNVTVKYSVNGENKEVTADYLLVTVGRRPNTDGDLGLDLAGVELTDRGLVKVD
HQGRTSNPNIFAIGDIVPGLALAHKASYEGKVAAEAISGLPSVVDYKAMPAVVFTDPECS
SVGYTEKEAKEKGYKVKAGKFPFAGNGRATSLNAPDGFIKIVANEENNVVLGAQIVGIEA
SNLIAELGLAIEMGATLEDISLTIHAHPTLGEIVMETAELVEGHPIHVLSR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagacgcttctcttgatatcgatacattagtagttggtgccggtcccggc
ggttatgtagcggccattcgcgcggctcagcttggacaaaaggtaatcatcgtagataaa
tcggaacttggcggtgtgtgcttgaaccgcggttgtattccatccaaagccctgatctcg
gcagctcatcaatatgaagctgccaagcatggcgaggcgttcgggatttctgctgacaac
gtgaaggttgacttctccaagacacaagcgttcaagaacggtgtcgtgaagaagatgact
caaggtgttggcggcttgctgaaggggaacaaggttgaggtattcagcggtgaagtgatg
ttcattaacgagaacgaagctcgtgcgttcaatgatcacgaatccccgcgctaccgtttc
aaacactgtatcctggctacgggttcccgtccaattgaactgaagccattcccgttcggc
ggacgtatcctttcttctacggaagcactgcagcttgaagagattccttcaagcctggtt
gttatcgggggcggatacatcggtgctgagcttgggcaaatgttctccaagttcggaaca
aaggtaacaatcattgaaggattggatactgtgcttcctggctttgacaaagacatgacc
cgtcttgtcgctaagagtatggagaagacaggtatcgagatcgttacaaatgcaaaagca
gaaagtgctgagcagactgacaagaacgtaaccgtgaaatactccgttaacggagagaac
aaagaagtaaccgcggattacctgcttgtaacagttggacgccgtccaaatacagacggt
gatctcggtcttgatcttgcgggtgttgaactgactgaccgtggtcttgtcaaagttgac
caccaaggccgtaccagcaatccgaatatcttcgcgattggcgatattgttccaggcctt
gccctggctcataaagcttcttacgaaggtaaagtggctgctgaagctatctctggactt
ccatctgtggttgattacaaagctatgccagcggttgtatttacagaccctgagtgctca
agtgtaggatacacagagaaggaagctaaggagaaaggatacaaagtgaaggcaggcaaa
ttcccgttcgcgggtaatggccgtgcgacttcccttaatgctcctgatggcttcatcaaa
attgtagctaatgaagagaacaatgtggttctgggtgctcaaatcgtaggtattgaagcg
tccaatctgattgctgagcttggcttggcaattgagatgggagcgactcttgaagatatc
tcccttaccattcatgctcacccgacacttggtgagattgttatggaaacggcggagctt
gttgaaggtcatccgatccacgtattgtcccgctaa
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