KEGG   Paenibacillus sp. YPG26: LDO05_09310
Entry
LDO05_09310       CDS       T11186                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
payg  Paenibacillus sp. YPG26
Pathway
payg00010  Glycolysis / Gluconeogenesis
payg00020  Citrate cycle (TCA cycle)
payg00260  Glycine, serine and threonine metabolism
payg00280  Valine, leucine and isoleucine degradation
payg00310  Lysine degradation
payg00380  Tryptophan metabolism
payg00620  Pyruvate metabolism
payg00630  Glyoxylate and dicarboxylate metabolism
payg00640  Propanoate metabolism
payg00670  One carbon pool by folate
payg00785  Lipoic acid metabolism
payg01100  Metabolic pathways
payg01110  Biosynthesis of secondary metabolites
payg01120  Microbial metabolism in diverse environments
payg01200  Carbon metabolism
payg01210  2-Oxocarboxylic acid metabolism
payg01240  Biosynthesis of cofactors
Module
payg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
payg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
payg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:payg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LDO05_09310 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LDO05_09310 (lpdA)
   00620 Pyruvate metabolism
    LDO05_09310 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LDO05_09310 (lpdA)
   00640 Propanoate metabolism
    LDO05_09310 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LDO05_09310 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LDO05_09310 (lpdA)
   00310 Lysine degradation
    LDO05_09310 (lpdA)
   00380 Tryptophan metabolism
    LDO05_09310 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LDO05_09310 (lpdA)
   00670 One carbon pool by folate
    LDO05_09310 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:payg04147]
    LDO05_09310 (lpdA)
Enzymes [BR:payg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LDO05_09310 (lpdA)
Exosome [BR:payg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LDO05_09310 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_binding_3 FAD_oxidored FAD_binding_2 HI0933_like Pyr_redox_3 DAO UDPG_MGDP_dh_N AlaDh_PNT_C NAD_binding_8 3HCDH_N Thi4
Other DBs
NCBI-ProteinID: USB34924
LinkDB
Position
1968533..1969948
AA seq 471 aa
MVVGDASLDIDTLVVGAGPGGYVAAIRAAQLGQKVIIVDKSELGGVCLNRGCIPSKALIS
AAHQYEAAKHGEAFGISADNVKVDFSKTQAFKNGVVKKMTQGVGGLLKGNKVEVFSGEVM
FINENEARAFNDHESPRYRFKHCILATGSRPIELKPFPFGGRILSSTEALQLEEIPSSLV
VIGGGYIGAELGQMFSKFGTKVTIIEGLDTVLPGFDKDMTRLVAKSMEKTGIEIVTNAKA
ESAEQTDKNVTVKYSVNGENKEVTADYLLVTVGRRPNTDGDLGLDLAGVELTDRGLVKVD
HQGRTSNPNIFAIGDIVPGLALAHKASYEGKVAAEAISGLPSVVDYKAMPAVVFTDPECS
SVGYTEKEAKEKGYKVKAGKFPFAGNGRATSLNAPDGFIKIVANEENNVVLGAQIVGIEA
SNLIAELGLAIEMGATLEDISLTIHAHPTLGEIVMETAELVEGHPIHVLSR
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggtagtaggagacgcttctcttgatatcgatacattagtagttggtgccggtcccggc
ggttatgtagcggccattcgcgcggctcagcttggacaaaaggtaatcatcgtagataaa
tcggaacttggcggtgtgtgcttgaaccgcggttgtattccatccaaagccctgatctcg
gcagctcatcaatatgaagctgccaagcatggcgaggcgttcgggatttctgctgacaac
gtgaaggttgacttctccaagacacaagcgttcaagaacggtgtcgtgaagaagatgact
caaggtgttggcggcttgctgaaggggaacaaggttgaggtattcagcggtgaagtgatg
ttcattaacgagaacgaagctcgtgcgttcaatgatcacgaatccccgcgctaccgtttc
aaacactgtatcctggctacgggttcccgtccaattgaactgaagccattcccgttcggc
ggacgtatcctttcttctacggaagcactgcagcttgaagagattccttcaagcctggtt
gttatcgggggcggatacatcggtgctgagcttgggcaaatgttctccaagttcggaaca
aaggtaacaatcattgaaggattggatactgtgcttcctggctttgacaaagacatgacc
cgtcttgtcgctaagagtatggagaagacaggtatcgagatcgttacaaatgcaaaagca
gaaagtgctgagcagactgacaagaacgtaaccgtgaaatactccgttaacggagagaac
aaagaagtaaccgcggattacctgcttgtaacagttggacgccgtccaaatacagacggt
gatctcggtcttgatcttgcgggtgttgaactgactgaccgtggtcttgtcaaagttgac
caccaaggccgtaccagcaatccgaatatcttcgcgattggcgatattgttccaggcctt
gccctggctcataaagcttcttacgaaggtaaagtggctgctgaagctatctctggactt
ccatctgtggttgattacaaagctatgccagcggttgtatttacagaccctgagtgctca
agtgtaggatacacagagaaggaagctaaggagaaaggatacaaagtgaaggcaggcaaa
ttcccgttcgcgggtaatggccgtgcgacttcccttaatgctcctgatggcttcatcaaa
attgtagctaatgaagagaacaatgtggttctgggtgctcaaatcgtaggtattgaagcg
tccaatctgattgctgagcttggcttggcaattgagatgggagcgactcttgaagatatc
tcccttaccattcatgctcacccgacacttggtgagattgttatggaaacggcggagctt
gttgaaggtcatccgatccacgtattgtcccgctaa

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