Paenibacillus sp. YPG26: LDO05_09755
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Entry
LDO05_09755 CDS
T11186
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00910
Nitrogen metabolism
payg01100
Metabolic pathways
payg01120
Microbial metabolism in diverse environments
payg01310
Nitrogen cycle
Module
payg_M00531
Assimilatory nitrate reduction, nitrate => ammonia
payg_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LDO05_09755 (nirB)
Enzymes [BR:
payg01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
LDO05_09755 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
DAO
HI0933_like
NAD_binding_7
GIDA
3HCDH_N
AlaDh_PNT_C
HCBP_related
DUF3197
Motif
Other DBs
NCBI-ProteinID:
USB31641
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Position
complement(2063147..2065588)
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AA seq
813 aa
AA seq
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MVKVQERRHLVLIGNGMAGINTVEQILKLAPSTYRITVFGSEPYPNYNRIQLSYVLEKSK
AVEDIILNDWDWYLENGIELYTGTTVTHIDTEQKIVKADNGMEVPYDTLIIATGSNPFIL
PVPGADKEGIVGFRDIADCQNMLHAADQYKKAAVIGGGLLGLEAAKGLLKLGMDVTVVHL
FEEIMERQLDHTASLMLQAELESQGLKFATGKQTEEFLGDDRVSGIRFSDGTTLDAEFVV
MAVGIRPNTALAKESGIEVNRGILVDDFMRTSVPNIYAVGECNEHRGISYGLVAPLFEQG
AVLAKHLCGVDTKPYEGSVVSTQLKISGVDVFSAGEFMDAEGLSIVRVHDDWRRIYKKVL
LRNGRIVGGVLVGDGKESSRLQQWIRTGTVMTEAIHNAIVGQASVETANTAADLADEEIV
CGCNGVTKKNIVDAINEKGLTTVDEIKVATSATRSCGGCRPVVEQILQYVLGDKYDSAAA
KKEAICSCTSLSRDEVVTAIKEKGLITSKEVRYALEWDNPEGCSKCRPALNYYLGMIWPA
EHVDEKDSRFVNERMHANIQKDGTFGVVPRMYGGVTTPEDLRLIADIAVKYNIKLVKVTG
GQRLDLLGVKKEDLPKIWQDLGMPSGYAYAKALRTVKTCVGSQFCRFGTKDSMGMGIILE
KKFERLDMPAKFKLAVNGCPRNCAESSTKDIGIVGNEGAWEIYVGGNGGIKARLAELLCK
VRTDEELLEIVSAFMQHYRETGKYLERTSEWIERMGLKSVTEAVVNDLDNRRALAERMEL
ALAQVKEPWSEILNNSNLRERMFEEISVSTKQD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagtacaagaacgtcggcatctggtcttaatcggcaacgggatggcgggcatt
aacacggtggaacagatattaaaattggcgccgagcacctacaggatcaccgtatttgga
agcgagccttatcccaactacaatcgtattcagttatcgtatgtgctagagaagagtaaa
gcagttgaagacatcattctgaacgactgggattggtatctagagaatggaatagagcta
tataccggaacaactgtaacgcatattgatacagaacagaaaatcgtgaaggcagacaat
ggtatggaggttccctatgacaccctcatcattgctaccggctccaacccgtttatacta
cctgttccaggagcagataaagaaggaattgttggcttcagagatatcgcagattgccag
aacatgctgcatgccgcagatcagtacaagaaggctgctgttattggcggtggcttgcta
ggactcgaggcggccaaagggctgcttaaacttgggatggatgtgaccgtggtccatctg
ttcgaagagatcatggaacgtcaactcgatcataccgcctcactaatgctccaggcagag
ctggaaagccagggtctgaaatttgctaccggcaaacagactgaggaatttcttggagat
gatcgggtcagcggtattcggttctcggacggaacaacgctggatgcggaattcgtagtc
atggcggtagggatcagaccaaacacagcattagccaaggagagcggtatcgaggttaat
cgaggtattcttgtggatgattttatgcgtacttcagtaccgaatatctatgcggtaggg
gagtgtaacgagcatcgcggtattagctatggactcgtagctccgctattcgagcagggg
gcggttcttgctaagcatctatgtggagtggatacgaagccatatgaaggatctgtggta
tctactcaactcaaaatatctggcgtagatgtgttctccgctggtgaatttatggatgcg
gaagggctgtctattgtgcgggtgcatgatgactggcggcgtatttacaaaaaagtgctg
ctgcgcaacggacggatcgtcggcggtgtcctggttggagacggaaaggaatcctccagg
ctgcagcagtggattcgaacaggcaccgtaatgacagaagccattcataatgcgattgta
ggacaagcttcggtcgaaactgcgaatacagccgcagatctggcggatgaggaaatcgta
tgcggttgtaatggggtaacgaagaagaacattgtggatgccattaacgaaaaaggatta
actacagttgatgagatcaaggtagcaacaagtgcaacgcgttcatgtggaggctgccgg
cctgttgtagaacaaattcttcaatatgtgctcggggataaatatgattcagcggcggcg
aaaaaggaagcaatctgttcctgtacctcactgagcagagatgaggtcgtcacggcgatc
aaggaaaaggggctaattacctccaaggaggtaaggtatgcgctggaatgggataacccg
gagggctgttccaaatgccgtcctgcgctgaactactatctgggtatgatctggccggcc
gagcatgtggacgagaaggactcacgttttgtgaatgaacgtatgcatgcgaacatccag
aaggacggaacatttggcgttgtgccgaggatgtacggcggggtaaccacaccggaggat
ctcagactcattgccgatattgccgtgaaatacaacatcaagctggttaaggtaaccggt
ggtcagcggcttgacctgctcggggtcaagaaggaggacctgccgaagatctggcaagac
cttggcatgccgtccggttatgcgtatgcgaaggcgctgcgtacggtaaagacctgcgtg
ggatcacagttctgccgttttggcacgaaagattcaatgggtatgggaattatactcgag
aagaagttcgagcggttagatatgccagccaagttcaagcttgctgttaacggctgtccg
cgtaactgtgcggagtcatcaaccaaggatatcgggatcgttggcaatgagggcgcttgg
gagatctatgttggtggtaatggcgggattaaagcccggcttgctgaactgctgtgcaag
gtgcgaacagatgaagagcttctggagattgtctccgcgttcatgcagcattaccgggag
acaggcaagtatctggagcggacctcggaatggattgaaaggatgggacttaaatccgtc
accgaagctgtagtcaatgatctggataaccgccgggctttggctgagcgtatggagctc
gctttggcgcaggtgaaggaaccttggagtgagatccttaataattcaaatttgagggaa
cgcatgtttgaagagatcagtgtctctacgaaacaggactag
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