Paenibacillus sp. YPG26: LDO05_09930
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Entry
LDO05_09930 CDS
T11186
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
payg Paenibacillus sp. YPG26
Pathway
payg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LDO05_09930 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
payg02000
]
LDO05_09930 (abc-f)
01504 Antimicrobial resistance genes [BR:
payg01504
]
LDO05_09930 (abc-f)
Transporters [BR:
payg02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LDO05_09930 (abc-f)
Antimicrobial resistance genes [BR:
payg01504
]
Gene variants
Macrolide resistance genes
Transporters
LDO05_09930 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
YobI-ATPase
AAA_22
ABC_tran_Xtn
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
USB31673
LinkDB
All DBs
Position
complement(2102475..2103953)
Genome browser
AA seq
492 aa
AA seq
DB search
MSLIQVKDLTFAYDGSYDNIFEDVSFNIDTEWKLGCTGRNGRGKTTLLHLFMSKYEYFGT
ISAQVQFDYFPYPIQNKERNTIDVIEEIYPDYVHWELMRELTWLQVSENVLYRPFDSLSQ
GEQTKVMLAALFLRENQFLLIDEPTNHLDMEARELVSQYLNTKSGFILVSHDRAFLDNCV
DHILSINKTDIVIQKGNFSAWWEQKERQDQYELAENEKLKKDIRRLAGAAERTSSWSHEV
EKTKNGTRNSGSKVDKGYIGHKAAKMMRRSKSIENRQQAAIEEKSSLLRNMESADNLKLS
QLHYHKSQLAELSHVSLYYGDHTVCSDVSFTIEKGDRIALSGRNGSGKSSILKLFTGEDI
GYTGEFRIGRQLSISYVSQDTSHLHGTLTHYAREQRIDESLFKAILRKLDFSRIQFEKDM
SFFSGGQKKKVLIAKSLCEQAHLHIWDEPLNFIDVISRMQIEQLLLDYNPTLVFVEHDRE
FCSQVATKIVKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaattcaggtcaaagatctaacatttgcctatgacggcagctacgataacatt
tttgaagatgtaagttttaatatagatacggagtggaagctggggtgtacagggaggaac
ggccggggaaagacgacactgcttcatttatttatgagcaaatatgagtactttgggacg
atctcggcccaagtgcagtttgactattttccttacccaattcagaacaaggaacggaac
acaattgatgtgattgaggaaatctacccggactacgtccactgggagcttatgagagag
cttacttggctgcaggtttcggagaatgtgctgtaccgcccgttcgattcactgtctcaa
ggagagcagacgaaggtgatgctggccgcgctgttccttagagagaatcagtttctgcta
attgatgagccgaccaaccatctggatatggaagcaagggaacttgtcagtcaatatctc
aatacgaagagtgggttcatactggtctcccatgaccgggcgttcctggataactgtgtg
gaccatattttgtctattaacaaaacagatattgtaattcagaaagggaacttctcagct
tggtgggaacagaaagagcggcaggatcaatatgagcttgcggagaatgaaaagctgaaa
aaagacattagacgtctcgcgggggctgctgaacgcacaagcagctggtcacatgaagtg
gagaagaccaagaatgggacgcggaattcaggctccaaggtggataaaggttatatcggc
cacaaggcagccaagatgatgagacgatccaaaagcatagagaaccggcagcaagctgca
atcgaagagaagtcctcactcttgagaaacatggagagcgccgataatctgaagctgtcc
cagcttcattatcacaaaagtcagcttgcagagctgagtcatgtatcgctctattatgga
gatcacaccgtatgctcagatgtaagctttacgatcgagaagggtgaccggatcgcactg
tccggcagaaatggctcaggcaaatcaagcattctgaagctgttcaccggcgaggatatt
ggctatacgggtgagttcaggattggcaggcagctgagcatatcctacgtatcccaggat
acctcgcatttgcatggaacgttaacccattatgcgcgcgagcagcgaattgatgagagt
ctgttcaaagctatactccgtaagctggatttctcccgcatccaatttgaaaaagacatg
tcgttctttagcgggggacaaaagaaaaaagtgcttatagccaaaagcttgtgcgagcaa
gctcatttgcatatttgggacgaaccactgaactttattgatgtcatctcccgcatgcaa
attgagcagctgctgctggattataatccaacactagtgtttgtcgagcacgatcgtgaa
ttttgcagccaagtggctacaaagatagtgaaattgtaa
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