Paenibacillus sp. YPG26: LDO05_10235
Help
Entry
LDO05_10235 CDS
T11186
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00910
Nitrogen metabolism
payg01100
Metabolic pathways
payg01120
Microbial metabolism in diverse environments
payg01310
Nitrogen cycle
Module
payg_M00531
Assimilatory nitrate reduction, nitrate => ammonia
payg_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LDO05_10235 (nirB)
Enzymes [BR:
payg01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
LDO05_10235 (nirB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
HI0933_like
GIDA
NAD_binding_9
NAD_binding_7
AlaDh_PNT_C
Amino_oxidase
Trp_halogenase
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
USB31732
LinkDB
All DBs
Position
complement(2166124..2168544)
Genome browser
AA seq
806 aa
AA seq
DB search
MKKKLVLIGNGMAGINTLEQLLKLAPEKYDITVLGSEPHPNYNRILLSSVLAGDASVQDI
VINDLDWYRDNGITLHTSQTVTRINTELRTVTTNKGLSVSYDDLIIATGSLPFMLPLPGA
DKEGVIAFRNIEDCEIMMDAAKQYKHAVVIGGGLLGLEAARSLLNLDMGVSVVHNSKYLM
DRQLDEIASNMLRSELESQGMNFLMEQNTDSILGDERVTGVRFKDGSEVKADLVVMAVGI
RPNVGLAKESGIEVNSGIVVNDYLETGTPHIYAVGECAEHEGVVYGLVAPLFEQGGELAK
RLAGIPSPGYKGSVVSTKLKVSGVNVFSAGQFLDQPGTRSFRIQDDFDHVYKKIVVQDGK
LIGTVLFGDTSDGSKLFSMIRTGQDISGQEKELVLGSQGTAKPQSGIQFVAAMSNDEIVC
GCNGVSKGDIQRAIEEKGCTNVNDVKYCTKATGSCGGCKPLVEDLLTYVLGSDGVTEVKE
GICGCTPLGREAVVEAIRSMKLTTSKEVMHVLDWKNPEGCSKCRPAVNYYLGMIWPVEHE
DEKESRFVNERNHGNIQKDGTYSVIPRIHGGVTTAKDLKRIADVAVKFNVETVKITGAQR
IGLYGIQKEDLPKVWEELDMTSGFAYGKSLRAVKTCVGSTWCRFGTQDSMSMGIELEKRL
ERISTPAKTKVAVSGCPRNCAEATIKDLGVVAIDGGWEIYVGGNGGTDVRAAELLVKLKS
EAEVIEWTLAYFQLYRENANYNERTSKWIERVGLEFIKRALASQEERRALQQRYEFSAGL
TSDPWTEIIEQERLNKNYEPLQPIRM
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaacttgtgcttattggtaatggtatggcaggaatcaacacacttgagcaa
ttgttaaagctggcaccggagaagtacgatatcacagtactgggtagtgaaccgcatccg
aactacaatcgtatcttgttatcttctgtgcttgctggtgatgcatcagttcaagacatc
gtaattaatgacttggactggtacagagacaacggaataacccttcataccagccagaca
gtaacacggataaatactgagctcagaactgtgaccaccaataagggattaagtgttagt
tatgatgacctgatcatcgcaacaggttcactgcctttcatgctgccgcttccaggagct
gataaggagggtgtgatagcttttcgaaatattgaagattgtgaaattatgatggatgct
gccaagcagtataagcatgctgttgtgattggaggtggattattggggcttgaggctgcc
cggagtcttcttaatctggatatgggagtatcggtggttcacaactccaagtacttgatg
gaccgccagttggatgagattgcttctaatatgcttcgttctgaactggagagccaggga
atgaatttcttaatggaacagaacaccgactccatattaggggacgaacgggtgactggc
gtccgattcaaggatggcagtgaagttaaggccgatttagttgtgatggctgttgggatt
cgcccgaatgtagggttggccaaagagagtggaattgaggtcaacagcggaatagtggtg
aacgactatctggaaacaggtactccccatatctatgccgtcggggaatgtgcagagcat
gaaggggtggtgtacggcttggttgctcctctctttgagcaaggaggtgagctggctaag
agacttgctggaattccatctccaggttataaaggctcggtggtctctaccaaattgaaa
gtgtcgggtgtgaatgtattctcggcaggtcaattcctggatcaacccgggacacgctca
ttccggattcaggatgatttcgatcatgtatataaaaaaattgtggttcaggacggcaag
ctgatcggtactgtgctctttggtgataccagtgacggctccaagctcttctcaatgatc
cggactggtcaggatatcagcggccaagaaaaagaactggtacttggttcgcagggaact
gccaagccacaatcaggtattcaattcgtggcagctatgtctaatgacgaaattgtgtgt
ggatgtaacggagtgtccaaaggagacattcagagggccatcgaggagaagggctgtacc
aatgtgaatgatgttaaatattgcaccaaagcgaccggaagctgtggcggatgcaaacca
ttggttgaagatttgctaacctatgtcctcgggtccgatggggttaccgaagttaaggaa
ggaatctgtgggtgcacgccgcttggacgtgaggcagtggtagaagcaatacgttccatg
aagctgactacttcgaaggaggtaatgcatgttctggattggaagaacccggagggatgc
tccaagtgcagacctgcggttaactattatctgggtatgatatggccggtagagcatgag
gatgagaaggaatcccgttttgtgaatgaacgcaatcatggcaacatccagaaggacgga
acatactcggtcatcccccggatccatggaggggttacaactgcgaaggatctgaaaaga
attgccgatgtcgcggtcaaatttaatgtggaaacggtgaagataacgggtgctcagcgg
ataggcttatatgggatccagaaggaagatctgccaaaagtatgggaagagctggatatg
acctctggatttgcatatggcaagtcccttcgcgcagtcaagacatgcgttggctctacc
tggtgccggttcggaacccaggattcaatgagtatggggattgagctggagaaacgactt
gaacgtataagtaccccggcaaagacaaaggttgccgtatctggctgtccccgaaattgt
gctgaagcaactattaaggacttgggggttgtggccattgatgggggttgggagatctat
gttggcggtaacggagggacggatgtccgggctgctgagttgctggtcaagctgaagtcg
gaagctgaagttatcgagtggacactggcgtacttccagttgtaccgcgagaatgccaat
tacaatgagcgtacatccaaatggattgaacgtgttggtttggagttcatcaagagagct
ctggcttcccaagaagagcgccgggctctgcagcagcgctacgaatttagtgcaggactt
acttccgacccttggacagaaatcattgagcaggaacgcctgaacaagaactacgaacca
cttcagcccatacgaatgtaa
DBGET
integrated database retrieval system
