Paenibacillus sp. YPG26: LDO05_12355
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Entry
LDO05_12355 CDS
T11186
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg02024
Quorum sensing
payg03060
Protein export
payg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LDO05_12355 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LDO05_12355 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LDO05_12355 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
payg02044
]
LDO05_12355 (ffh)
Enzymes [BR:
payg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LDO05_12355 (ffh)
Secretion system [BR:
payg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LDO05_12355 (ffh)
Eukaryotic Sec-SRP protein
LDO05_12355 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
AAA_22
CbiA
Zeta_toxin
AAA_17
APS_kinase
AAA_30
ResIII
nSTAND3
AAA_31
AAA_33
ArsA_ATPase
6PF2K
AAA_18
TPP_enzyme_M
AAA_16
TsaE
SHPRH_helical-1st
MMR_HSR1
FIST_C
Thymidylate_kin
AAA_14
AAA_19
Motif
Other DBs
NCBI-ProteinID:
USB32126
LinkDB
All DBs
Position
complement(2623547..2624932)
Genome browser
AA seq
461 aa
AA seq
DB search
MAFEGLTSRLQNVFSKLRGKGKVSEDDVNEAMREVRLALLEADVNFKVVKEFIAKVKEKA
IGSEVMDSFTPGMVIIDIVNKELTDLMGGSQAKLAKSNKPPTVIMMAGLQGAGKTTTSAK
LAKLLLKQNHRPLLVAGDIYRPAAIKQLQVLGEQIGVPVFALGDGVNPVEIARQALQHAK
ENSNDYLIIDTAGRLHVDEQLMEELRQIHEITTPDEVLLVVDAMTGQDAVNVAESFHKQL
ELTGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDM
LSLIEKAQSNIDAEKAKEMERKMRNAEFTFDDFLEQMDQVKKLGPIDQIMDMIPGMGKVK
QLKDVKVDEKQMGRVEAIVHSMTKQEKQNPEMINNNRRKRIALGSGTSVADVNRLIKQFD
EMRRMMKQFSDMMGGPKAGKMAKAMKGMKGLKGGGMKFPFR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaaggattgaccagccgactgcagaatgtgttcagcaagctgcgcggtaaa
ggcaaggtatcggaagatgatgtgaatgaggctatgcgcgaggtgcgccttgccctgctc
gaagcggacgttaactttaaagtggtcaaagaatttatcgccaaggtgaaggagaaggcc
atcggcagcgaagtgatggatagcttcacacccggaatggtcatcatcgacatcgttaac
aaggaattaacggatctgatgggcggcagccaagcgaagctggctaagagtaacaagcct
ccaaccgtaattatgatggcgggtcttcaaggggccggtaagacgacgacctcggccaag
ctggccaagcttcttctgaagcagaatcaccggccgctgcttgtcgcgggagatatatat
agacccgctgcaatcaaacagcttcaggtgctcggtgagcagattggggttcctgtattt
gcactgggtgatggtgttaatccggtcgagattgcccgtcaggcgcttcagcatgccaag
gagaacagcaacgattatctgattattgatacagcgggccgtctgcacgtggacgagcag
ctgatggaagagcttcgtcagattcatgaaattacaacgccggatgaggtgctgctggta
gtcgatgccatgactgggcaggatgccgtcaatgttgcggagagcttccataagcagctt
gagctcacaggggttgtactcaccaagctggatggcgatacccgcggtggtgccgcttta
tctgttaaagctgttaccggctgtccgatcaagttcgcggcacttggggagaagattgat
gcactggagcctttccatcctgagcggatggcctcccggattctcgggatgggcgatatg
ctctctcttattgagaaggcccagtccaatattgatgctgagaaagccaaggaaatggag
cgcaaaatgcgcaatgccgaattcactttcgacgatttccttgagcagatggaccaggtt
aagaagcttggacctattgatcagatcatggatatgatcccgggaatgggcaaggttaag
cagctcaaggacgttaaggtcgatgagaagcagatggggcgcgttgaagcgattgtgcat
tccatgaccaagcaggagaagcagaatccggagatgatcaataataaccgccgcaagcgg
attgcactcggcagcggtacttccgtagctgatgtcaaccggctgattaagcagtttgat
gagatgcgccggatgatgaagcaattctcggatatgatgggtggtcctaaagctggcaag
atggctaaggccatgaagggtatgaaaggtctgaaaggcggcggaatgaaatttccattc
cgttaa
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