Paenibacillus sp. YPG26: LDO05_12380
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Entry
LDO05_12380 CDS
T11186
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
payg Paenibacillus sp. YPG26
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LDO05_12380 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
payg03019
]
LDO05_12380 (rnc)
03009 Ribosome biogenesis [BR:
payg03009
]
LDO05_12380 (rnc)
03036 Chromosome and associated proteins [BR:
payg03036
]
LDO05_12380 (rnc)
Enzymes [BR:
payg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LDO05_12380 (rnc)
Messenger RNA biogenesis [BR:
payg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LDO05_12380 (rnc)
Ribosome biogenesis [BR:
payg03009
]
Eukaryotic type
90S particles
RNase
LDO05_12380 (rnc)
Prokaryotic type
rRNA processing factors
LDO05_12380 (rnc)
Chromosome and associated proteins [BR:
payg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LDO05_12380 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
USB32131
LinkDB
All DBs
Position
complement(2631722..2632417)
Genome browser
AA seq
231 aa
AA seq
DB search
MSGDLKQLQQKLQIQFQNRQLLKQAFTHASYVNEHRFSQHEDNERLEFLGDAVLELTVSE
YLYNLFPNRPEGELTKQRAAIVCEPSLVKFAEALEFGNYVLLGKGEELTGGRTRPALLAD
VFESFVGALYLDQGLEAVSAFLDKHVFTQVVLNGKLQVTDYKTELQELTQHHNLGALEYR
IIEERGPAHEREFVSEVFMDGKSLGQGSGRSKKEAEQQAAAVALERLRVQG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttgagtggagatctgaagcagttacaacaaaaacttcaaattcaattccagaaccgacaa
ttgttgaaacaggcatttactcacgcttcctatgtaaacgaacaccggttcagccagcat
gaggacaacgagcggcttgaatttttgggagacgcggtgcttgagctgaccgtctcggag
tatctatacaacctatttccgaaccggccggaaggcgaattaaccaagcagcgtgccgct
attgtctgcgagccttctctggttaaatttgctgaagctcttgagttcggaaattatgtg
ctcctgggcaaaggagaggaactaaccggggggcgtacgcgtccggcattgcttgcggat
gtgtttgagtcttttgtcggtgcgttatacttggatcagggacttgaggcagtcagtgcc
ttcctggacaagcatgtattcactcaggtggtcttaaacggaaagcttcaggtaactgat
tataagacagagcttcaggagctgacccagcatcataatctgggggcgcttgaataccgg
attattgaagagcggggacccgctcatgagcgggaattcgtctccgaggtattcatggat
ggcaagagtcttggacaagggagcggccgctccaagaaagaggctgagcagcaggccgcg
gcagttgccctggagcgtttaagagtacaagggtag
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