Paenibacillus sp. YPG26: LDO05_12550
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Entry
LDO05_12550 CDS
T11186
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg03420
Nucleotide excision repair
payg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LDO05_12550
03430 Mismatch repair
LDO05_12550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
payg03400
]
LDO05_12550
Enzymes [BR:
payg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDO05_12550
DNA repair and recombination proteins [BR:
payg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LDO05_12550
MMR (mismatch excision repair)
Other MMR factors
LDO05_12550
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
USB32163
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Position
complement(2662431..2664776)
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AA seq
781 aa
AA seq
DB search
MSINDQDWQEEQTRVSDVTQLIGKRIKRLEQEVGSVRGDVVEMRKDFWDEVTMNFSESDD
VGETSTSLRQQSEILSDRERSHLHAYAALGKMKRLFQSPYFGRIDFAEEGEQPEAIYLGI
ASLLDEKDEQFLVYDWRAPISNLYYDSTPGPASYQTPSGQIEGTIELKRQYVIRDGEIKL
MFDTGVTIGDELLQQVLSRSSDAQMKSIVATIQKEQNRIIRNDRSRMLIVQGAAGSGKTS
AALQRVAYLLYKYREHLKAEQVILFSPNPMFNSYVSTVLPELGEENMRQTTFQEYLEHRI
GREFQLEDPFEQLEYVLSRYDEEGYKARIEGIRYKSSHQYYKAINNYRDKLEQGLMRFRP
LRFQGQEIVSAASIQERFYAYDRSVRLANRCELLKEWLLKELAAFAKSELDKPWVEEQIQ
LLDSEEYQRAFQRMRRKNRRKSESYNDYEDEKTILAKMVVSSKLKPLRRWVKALRFVDNK
QLYAQLFEQPKLMQELNEGELPEHWSEISAFTLNKLKKTELAYEDATPMLYLKELILGFH
SNTSIRHVFIDEAQDYSPFQLFFLKRLFPRARMTALGDLNQAIYAHASALQQSSVLTDLY
GEEESEQIILTRSYRSTREIVEFTKGMIPGGEQIQAFNRAGELPKVQRVKDHNQLHQALA
EDIEMLRAEGYETIAVICKTAAESLAAYQVLEEVPSVKLIKKTTLNFERGIHVIPAYLAK
GVEFDAVLIYDGSEASYARETERKLFYTACTRAMHLLHIYSVGEISPFIAQVNPDTFVSL
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgagtataaatgatcaggactggcaggaggaacagacacgggtaagtgatgtaactcag
ctcattggcaagcgaatcaagcgtttggagcaggaagtgggcagcgttcgtggagacgtt
gtggagatgagaaaagacttctgggatgaggtgacaatgaatttcagcgagtctgatgat
gtcggagagacgtctacaagtcttcgccagcagtctgagatcctgtccgaccgggagcgg
agtcacctgcatgcctatgccgcccttggcaaaatgaaacgcctgttccaatctccttac
ttcggaagaattgattttgctgaagagggggaacagccggaagctatctacctcggcatt
gcatctctccttgatgagaaggatgaacagtttctggtctacgactggcgtgccccaatc
tcgaatttgtattacgacagcaccccgggtcccgcatcctatcagactccatcaggccag
atcgaggggacgattgagctcaagaggcagtatgtcattcgtgacggtgagatcaagctt
atgttcgatacaggcgtaaccataggggatgagctgctgcagcaggtgctcagccgttcc
tctgatgcgcagatgaagagcatcgtagcaacgatacagaaggagcagaaccggattatc
cgcaatgaccggagccggatgctgattgtccagggtgcggccgggagcggcaagacctca
gcggctcttcaacgcgtggcatatttgctctacaaatacagggagcatttgaaggcagag
caggtcatcctgttctccccgaaccccatgttcaatagttatgtctcgaccgttctccct
gagcttggcgaagagaatatgcgccagactacatttcaggagtatcttgaacaccggatc
ggcagggagtttcagcttgaggatccttttgaacagctggaatacgtgctctccaggtat
gatgaagagggttataaggctcggatagaaggtatccgttacaaatcctcccatcagtat
tacaaggccattaataactatagagacaagcttgaacagggtctgatgcgtttcaggcct
ttgcgcttccaggggcaagagattgtaagtgcagcctctattcaggaacgcttttacgct
tatgaccgttccgttagactggccaaccggtgtgaattgttgaaggaatggctgctcaaa
gagctggcggccttcgccaagagtgaacttgacaaaccttgggttgaagaacaaattcag
ctgctggatagcgaagaatatcagagggctttccagcggatgcgccgtaaaaatcgccgg
aagagtgagtcctacaatgattatgaggacgagaagacgattttggccaaaatggtggtc
agcagcaagctcaagccgcttcgcagatgggtgaaggctctgcggttcgttgataacaag
cagctgtatgcccagctgtttgaacagccgaagctgatgcaggagctgaatgagggagag
cttccggaacactggtccgagatcagcgccttcactctgaacaagcttaagaagactgaa
ctcgcttacgaggacgcaaccccgatgctgtatcttaaggagcttatactcgggttccat
tccaatacatctatccgccatgtctttattgacgaagctcaggattattcaccatttcag
ttgttcttcctcaaaaggctcttccctagagcccggatgaccgcacttggtgaccttaac
caggccatttatgcccatgcttcggcacttcagcagtcttcggtgctgaccgatctctat
ggggaagaggagagcgaacagattattttgacacggagctacagatcgacgagagaaatt
gttgaattcaccaagggaatgatccctggaggagagcagattcaggcatttaaccgggcc
ggggagctgcctaaggttcaacgtgtgaaggatcataatcaacttcatcaggctttagcg
gaggatatagagatgctgcgggctgagggatatgagacgattgccgtcatctgcaagaca
gccgcagagagcctggccgcctatcaagtgcttgaagaggtgccttcggtaaaactgatc
aagaagacaaccctgaattttgagcggggcattcatgtaatcccggcatatctggctaaa
ggtgtggaatttgatgccgtgcttatatatgacgggtcggaagcttcctatgcccgtgag
acagagcggaagctcttctacacggcatgcacccgggctatgcatctgctccatatctat
tcggttggcgaaattagcccctttattgcacaagttaatccggacaccttcgtgagcctg
acttga
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