Paenibacillus sp. YPG26: LDO05_14585
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Entry
LDO05_14585 CDS
T11186
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00020
Citrate cycle (TCA cycle)
payg00190
Oxidative phosphorylation
payg00650
Butanoate metabolism
payg00720
Other carbon fixation pathways
payg01100
Metabolic pathways
payg01110
Biosynthesis of secondary metabolites
payg01120
Microbial metabolism in diverse environments
payg01200
Carbon metabolism
Module
payg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
payg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LDO05_14585 (sdhA)
00650 Butanoate metabolism
LDO05_14585 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LDO05_14585 (sdhA)
00720 Other carbon fixation pathways
LDO05_14585 (sdhA)
Enzymes [BR:
payg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LDO05_14585 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
FAD_oxidored
DAO
NAD_binding_8
FAD_binding_3
SBNO
AlaDh_PNT_C
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
USB32516
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All DBs
Position
complement(3065192..3066934)
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AA seq
580 aa
AA seq
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MAKQSIVIVGGGLAGLMATIKAAEAGVHVTLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWEHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTK
RHRTAFAGATTGQQLLYALDEQVRRYEAAGLVTKHEHWEFLSAVLDDEGVCRGICAQDLR
SMEIQTFMSDAVILATGGPGIIFGKTTNSVINTGTAASAVYQQGVKYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPSYGNLVPRDIATREIFHVCVDEK
LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFMGDDPRKIPMKIFPAVHYSMGGMWV
DYNQMTNIPGLFAAGECEYQYHGANRLGANSLVSAIFGGMQAGPKAVEYIRGLKKSAEDI
QPGVYSSAKKQQEEKYMNILAMNGTENAYVIHKELGEWMTDNMTVVRYNSKLEATINKIK
ELKVRYKNININDVSNWNNSGAAFTRQLWNMLELSEAMTLGALLRNESRGAHYKPEFPDR
NDEEFLKTTKATWTPEGPQIAYEDVDVSLIPPRVRDYSKD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaagtattgtcattgtcggcggaggtctagccggcttgatggccaccatc
aaagctgcggaagcgggagtacatgtaacgctgttctccctcgtgccggtcaaacggtca
cactccgtgtgcgcgcagggtggaattaacggagcagttaacaccaagggtgaaggtgat
tcaccatgggagcatttcgatgacaccgtctatggcggagacttccttgccaatcagccg
ccggttaaggcgatgtgtgaagcggcacctggaattatccacctgatggaccggatgggc
gtcatgttcaaccggacaccggaaggcctgcttgacttccgccggttcgggggcacgaag
cgccaccggaccgccttcgcaggcgctactaccgggcagcagctcctgtacgccttggat
gaacaggttcgcagatatgaagccgcaggacttgtcaccaagcatgagcactgggagttc
ctctcggcagtgctggacgatgagggcgtatgccgcggaatttgtgctcaggacctgcgg
tccatggagatccagaccttcatgtccgatgccgtcattctggcgacgggaggccctggt
attatttttggtaaaaccacgaactctgtcatcaacacaggtacagcggcgagtgctgta
tatcagcaaggtgtcaaatatgcgaacggtgaattcatacagattcacccgaccgccatt
ccaggggatgacaagctgcggctgatgtcggaatccgcacgtggtgagggtggacgcatc
tggacttacaaggatggcaagccgtggtacttccttgaagagaaatacccgtcatacggc
aatcttgtgccgcgcgacatcgcaacccgcgagatcttccatgtatgtgtcgatgagaag
ttggggattaacggggagaacatggtgtaccttgatctatcccataaagacccgaaggag
cttgatgtcaagcttggcggtattatcgagatctacgagaagttcatgggtgatgacccg
cgtaagattcctatgaaaatattcccggcagtccattattccatgggcggcatgtgggtg
gactacaaccaaatgaccaatattcccggcctgttcgcggctggagagtgtgagtatcaa
tatcacggcgccaaccggcttggcgcgaattcgctcgtatctgccatcttcggcggcatg
caggctggtccgaaggcagtggaatatatccgcggtcttaagaaatcagctgaagatatc
cagccaggcgtatacagcagtgcgaagaagcagcaggaagagaagtacatgaatatcctt
gccatgaatggtaccgaaaatgcttatgttattcataaagagctcggcgagtggatgaca
gataatatgaccgtcgttcgttataatagcaagcttgaagcgacgattaacaagattaag
gaacttaaagtccgttataagaacattaatatcaatgatgtgtcgaactggaacaacagc
ggcgcggcatttacccgtcagctgtggaacatgctcgagctgtccgaagccatgacactt
ggagctctgctgcgcaatgagagccgcggtgcccattataagccggaattcccggatcgt
aatgatgaagaattcctgaagacaaccaaagctacatggacgccggaagggcctcaaatc
gcatatgaggacgtggatgtatccttgatcccgccgcgcgttcgagactattcgaaggat
taa
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