Paenibacillus sp. YPG26: LDO05_15280
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Entry
LDO05_15280 CDS
T11186
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
payg Paenibacillus sp. YPG26
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
payg03021
]
LDO05_15280
Transcription machinery [BR:
payg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LDO05_15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
GerE
Sigma70_ECF
HTH_38
HTH_28
HTH_Tnp_ISL3
HTH_50
DUF1492
KORA
HTH_24
HTH_29
MarR
HTH_3
HTH_10
HTH_31
Phage_antitermQ
MarR_2
TnsD
Motif
Other DBs
NCBI-ProteinID:
USB32618
LinkDB
All DBs
Position
complement(3200445..3201215)
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AA seq
256 aa
AA seq
DB search
MTDRLTPPESMNEAIGLIWEYQQTKDNEIATVLIKKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDIDLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTVKLERSPDVKEIASFLDLSVEETVEVLAGRECYHYVSLDSPLSQDESTATLGEL
ISSEANDFDTVEKRMDLQQALSQLKEQEQSVLLLAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNSGS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagactgactcccccagagtcgatgaacgaagcaatcggtctaatctgggaa
taccagcagaccaaagataatgaaattgccaccgtgctcatcaagaaatatgagcccatg
gtgaagatggcggcaggcaagatcgcccgcaaccgtcctgacttatatgaggatctatat
caggtagggcagatggctctgatccgccttcttcagcagtatgacattgatctgggtatc
ccctttgagccctacgcgatgaagagtatgattggtcatatgaagaacttcctgcgggat
aaatcctggtatatccaggtgccgcgccgaattaaggaaaagggagccttggtgcagcaa
gcgatcgatgagctcaccgtgaagcttgagcggtcgccagatgtgaaggagattgcctca
ttcctggatctatccgtggaagagacggttgaagtgctggccggaagggaatgctatcat
tatgtatccctggattcaccgctatcccaggatgagagtacggcaacgcttggggaatta
atcagctctgaggcgaacgactttgatacggtcgagaaaagaatggaccttcaacaagcc
ctcagccaattgaaggaacaggagcaaagtgtgctgcttctggcattccaggatggtcaa
tcacaacgtgcaattgcacagaagctgggagtatcccagatgagcgtatcacgtatccaa
aaaagagcgaccgagaagcttaagcagattatgtctaactcggggtcctaa
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