Paenibacillus sp. YPG26: LDO05_15920
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Entry
LDO05_15920 CDS
T11186
Name
(GenBank) bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
KO
K08693
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:
3.1.4.16
3.1.3.6
3.1.3.5
]
Organism
payg Paenibacillus sp. YPG26
Pathway
payg00230
Purine metabolism
payg00240
Pyrimidine metabolism
payg00760
Nicotinate and nicotinamide metabolism
payg01100
Metabolic pathways
payg01110
Biosynthesis of secondary metabolites
payg01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
payg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LDO05_15920
00240 Pyrimidine metabolism
LDO05_15920
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LDO05_15920
Enzymes [BR:
payg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.5 5'-nucleotidase
LDO05_15920
3.1.3.6 3'-nucleotidase
LDO05_15920
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
LDO05_15920
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NCBI-ProteinID:
USB35142
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Position
complement(3341844..3346622)
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AA seq
1592 aa
AA seq
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MHAAASSNAGTLSSEQTSSAAALLTNQDPTNTPADDTTPAVNSNLKLRIMETTDIHTNLM
SYDYYKDQVSPTVGLVKTASLVKQAREEVKNTLLVDNGDLIQGTPLGTYVAKVDQLQEPG
SVHPVYKAMNMMGYDIATFGNHEFNYGLDFLNKSIQGASFPYVNANVYVDDHDNNPDNDE
NKYDPYEILNKTYIDEEGNEQTVKVGVLGLVTPQIMDWDKGHLEGKVTTKDIVATAEKFV
PKMKEEGADIIIALTHSGFDAGAEANTMAENAILPLSKVKGIDAITFSHTHKVFPTGDNK
SLDVIFKDTSGNPVAGVDNVRGTINGVAAVQAGFGGAELGIIDLTLTKNAEGRWTVSSSQ
SSNREIYDKVNKKPLVTADPAIEEAVKSEHEATIKYANGPIGETSAPIYSYFALVKDDPS
VQIVTKAQEWFVKDYISKNAPQYKDLPILSVGAPFKAGRNGPAEYTDIAKGPIAIKSASD
LYLYDNTLKAVKVKGSTVKEWLEMSAGMFNQIDPAKTEEQSLLSPKFAVYNFDIIDGVTY
QFDVTKPAKYNADGSTNNAESSRIVNLKYGGKDINPEQEFIVVTNNYRAGGGGNFPGLKG
AELVVDSADENRQILMNYITEHKDIDPAADNNWSILPVNDKVNVTFTSSPDAVKYLNNNT
EIKYTNKTDEKGFGVYSLSLAGGTTPPVDPGSNVKVQILGINDFHGQLDTTSNFGEGNVG
RADYLAAYLNKARATNPNTLLVHNGDSVGASAPVSSLERDKPTMDFLNMMKFDVGTLGNH
EFDQGVPALLAQVNGGPDPIKPEIVFDKANFDYINANALYKSPSATEDTYAPIVKPYVIK
EIGGEKVGFIGVVTMATVTKVSPSALSGVKLVEQAPVVNAAVKELQAQGVHAIVVLAHDP
ASTKNEVTTGEAVDLAKAVDPDVDVIFAGDNHAKVNTVINNKLIVQAYSYGTAYADIDLE
IDPKTHDIVKKQADVVDVKQEGVTPDPQVTKLVNDALARHPELTKPVGTTTVAITRTNAY
NAESALGNLIADAMRDTMDTDFAFMNPGGIRADLPKGDITFSDLAKIQPFGNSLVKLQVT
GAQIRTLLMQQWGKNADGTDNIKTLQISGLKYTADFRRPIEQRVTALAKEDGTPIDDKAL
YTITVNNFMAAGGDNYKVLTEGKDLTTGTTVNDLDAFYNYIVKKFKGGVIASSLQGRITN
IYNSGNGGSTPNTGTTTPNPATGSVIIKPADLPKPQNGLLSVNVTILQNQASTEVLLPGT
LGQVAGDNSVQLNLGVASVVIPKEVVDSLTKLIPSDKQSGSQIALQVNQLTSEQTAQISS
ANSTSGAAVQPASSILELTLSAKDSSGKATRLDQFSKPIALTFQLTGQADHTLLGVYYIS
DSGSMQYIGGKITGNTMTAEVTHFSKYGVFAYDKSYSDVPAGHWGNRVIRELTAKHVVKG
VSDKSFAPEQEITRAEFAAMLVRQLNLKATKAVQLADVSQDSWYADAIAAAYSSGLVNGI
SSTQFGPDKKITREEMSVMIVKAYNLTTGKTSEAGAAAFKDSSDISTWAKNDVAAAVKEG
LLKGRSADTFAPKKQATRAEASQVMYNLIHKL
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcggcggcttcctccaatgctggaaccttgtcatcggagcagacatcatctgcg
gcagctcttttaacaaatcaagatccgactaacaccccagctgacgatactactcctgct
gttaactctaatcttaagctaagaataatggaaacaaccgatattcatacaaatcttatg
tcctatgattactataaagatcaagtttcgccaactgttggtttggttaagacagccagc
ttagttaagcaagcgcgtgaggaagttaagaacacattgctggtcgataacggtgatctg
attcaaggaactcctctcgggacctacgtggctaaagtagatcagctgcaggaacctggg
tcggttcaccccgtgtataaagcaatgaatatgatggggtacgacattgctacgtttggt
aaccacgagttcaattatggtcttgatttcttgaacaagtcaattcaaggagcaagcttc
ccttatgtgaatgccaatgtatatgtcgatgatcatgacaataatccagataatgatgag
aataaatatgatccctacgaaattttaaataaaacttatattgatgaagaaggaaatgaa
caaacagtcaaagttggggtactgggtctagttactccacagattatggactgggataaa
ggccacctcgaaggtaaagtgactacaaaagatattgtggcaactgctgagaagtttgtt
cccaagatgaaggaagaaggagccgatatcattatcgctctgacacattcaggctttgat
gcgggcgctgaagccaacactatggcagagaatgcgattcttccactgagcaaagtgaag
gggatcgatgcaattactttctctcatacccataaggtatttcctacaggtgacaataag
tcactagatgttattttcaaggatactagtggcaatccggttgcaggtgttgataatgta
cgaggtacaattaacggtgtagcagctgttcaagcaggctttgggggtgctgagcttggt
atcattgatctgacgcttaccaagaacgctgaaggtcgttggacagtatccagctcgcaa
tcctcgaacagagaaatctatgataaggtgaataagaagcctctcgtaactgctgatcct
gcaattgaggaggcagtcaagtcagagcatgaggcgacaattaagtatgcgaacggtccg
attggagagacttcggcaccgatttatagttacttcgcattagtgaaggatgatccatct
gtacaaatcgtgaccaaggcgcaggaatggtttgttaaggactatatcagtaaaaatgcg
ccccagtataaagatctgccaattctatccgtaggagcgcctttcaaagcaggtagaaac
ggtcccgccgagtacacggatatcgctaaagggccaatcgcgattaagagcgcaagtgac
ctttatttgtacgacaacacgttaaaagctgttaaagttaaaggttccacggtaaaagag
tggctcgagatgtcagcgggaatgttcaaccagatcgatccggccaagacagaggaacag
tcgcttttaagtcccaagttcgccgtgtataactttgacatcattgatggcgtaacctat
cagtttgatgtaaccaagccggctaaatacaatgcggatggcagtactaataacgcagag
tcgagccgaattgtgaatctcaaatacggtggcaaggacattaatcctgagcaggaattc
atcgtagtgacgaacaactatcgcgctggcggtggcgggaacttcccgggccttaagggt
gctgaattagttgtcgactctgctgatgagaaccgtcagatcctgatgaactatatcaca
gagcataaggacattgacccggcagcagataacaactggtcgattctgccggtaaatgac
aaggtgaatgtaactttcacatcctctcctgatgcagtgaaatacttgaataacaataca
gagattaaatatacgaacaaaaccgatgaaaagggatttggagtctactcactttcattg
gcaggaggaactacgcctccagtagatccgggttctaatgtgaaggtacagattctaggt
attaatgacttccacggccagcttgatacgacatcaaattttggtgagggaaatgttggt
cgtgccgactacctcgcagcttatttgaacaaagccagagccaccaacccgaatacgctt
ctggttcataacggcgattccgttggcgccagcgcaccggtgtcctctctggaacgggat
aagcctacgatggatttcttgaatatgatgaaatttgatgtgggtacactgggcaaccat
gaatttgaccagggggttcccgcgcttctcgctcaagtgaacgggggaccggatccgatt
aaacctgaaattgtttttgataaagccaattttgattatattaatgccaatgctttgtat
aaatctccatcagcaacagaggatacctatgcgcctattgttaagccatatgtcatcaag
gaaattgggggcgagaaggtaggatttatcggtgtggtaacaatggcaacagttacaaag
gtatcgcctagtgcgctttcaggagtgaagctggtagaacaggctccggtagtcaatgca
gctgtaaaagaacttcaagctcaaggtgtgcatgctattgtagtgctcgcccatgacccg
gctagtactaaaaatgaggtaactaccggtgaggctgtagacttggctaaggctgtcgat
cccgatgttgatgtaatttttgccggagacaatcatgctaaagtaaatactgtcatcaac
aataagctgattgtacaggcttactcgtatggtacagcctatgcggatatcgacctggaa
attgaccctaagactcatgatattgttaagaaacaagcggatgttgttgacgtgaagcag
gagggagtcactcctgatccgcaggttacgaagctcgttaatgatgcactggccagacat
ccggagctcacaaagcctgtgggtaccactactgtggctattaccagaactaatgcttat
aatgctgagtccgcactcgggaacttaattgctgatgctatgcgggataccatggataca
gacttcgctttcatgaacccgggtggaattcgtgcggatcttcctaaaggggatatcacc
ttctcggatttggccaaaattcagccttttggtaattccctggtgaagctccaagtgact
ggggctcagataagaactcttcttatgcagcagtggggcaaaaatgcggatggcactgat
aatatcaaaacacttcaaatctcaggcttgaagtacacagctgactttagaagaccgata
gagcaaagggttacagccctcgccaaagaggacgggacaccgatcgatgataaagcccta
tatactataacggtgaataactttatggcagcaggcggggacaattataaagttcttacc
gaaggcaaggatttgactacaggcacaacagtgaacgatttggacgcgttctataattac
attgttaagaaattcaagggcggagtaatagcttccagcttgcagggcagaatcacaaat
atttataactcaggaaacggcggcagcactcctaacacaggaactacaacgccaaatcca
gctacaggctcagtgattattaagccagctgatctgcctaagcctcagaatggactgctt
agcgtgaatgtcaccattcttcagaatcaagccagcacggaagttctgttgccgggaact
ctgggtcaggttgccggggacaatagtgtccagcttaacctgggagtggcttcagtggta
attccaaaagaagttgtggatagtctgaccaagctgattccttcggataaacagagcggg
tcacagatcgctttgcaggttaaccagctgacttctgaacagacagcccaaatctcgagt
gcgaacagcaccagtggagcggcagtgcagcctgcgagttcaattctggaactgacactc
tctgccaaagacagtagtggaaaggcaaccagactggatcaattctccaagccgatcgcg
ttaaccttccaattaacagggcaagcggatcacacgttgcttggtgtgtattacatttca
gatagcggaagtatgcaatatattggcgggaagatcactggaaatacaatgactgccgag
gttacccattttagtaaatacggagtctttgcttacgacaaatcgtacagcgatgtgcca
gccggtcactggggtaaccgagttatcagagaacttacggctaagcacgttgtgaagggg
gttagcgataagagctttgctcctgaacaagagattacccgcgccgagttcgcggccatg
ctggttagacagctgaacctgaaagctacgaaggcggttcagttagctgatgtaagccaa
gacagctggtatgcggatgccattgcggcagcttacagcagcggcctggttaacggcatc
agcagcactcagttcgggcctgacaagaagattacccgcgaagagatgagtgtcatgatc
gtcaaagcttacaatctgaccaccggtaagactagcgaagcaggagcagctgcattcaag
gatagcagcgatatcagcacctgggccaagaatgatgtggctgcggcggtgaaggaagga
ctgctcaaaggacgctctgcggacacctttgcacctaagaagcaggcaacccgggccgag
gcttctcaagtgatgtacaaccttattcataagctgtag
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