KEGG   Paenibacillus sp. YPG26: LDO05_16605
Entry
LDO05_16605       CDS       T11186                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K02240  competence protein ComFA
Organism
payg  Paenibacillus sp. YPG26
Brite
KEGG Orthology (KO) [BR:payg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:payg02044]
    LDO05_16605
Secretion system [BR:payg02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   LDO05_16605
SSDB
Motif
Pfam: Helicase_C DEAD ResIII ComFA_N Flavi_DEAD AAA_22 AAA_30
Other DBs
NCBI-ProteinID: USB32849
LinkDB
Position
complement(3485164..3486813)
AA seq 549 aa
MYVLKEKDSQPVWLWAKERGYSPAGRDLCFGEEPYWKDFGHALEAARLLAWALQGRSLLV
PELKQLLESRLPQLADGWRGAAQLAHLRGEVQLTSGVAPAVRRSLLRRGQPPRCRRCGSA
ALTAAPCASCGSPACAYCAACLALGRSRACALLLRGAPETAAVHRAAGREAPTGAALDRW
GLSSAQREAAYAALRFLAERPAGGDRSAGRRQVCGPPRFLLWAVTGAGKTEMIFPLLRHV
LDQGGRALVATPRRDVVLELAPRIAKAFPDEPVAILYGGSSHRWEESRLVLATTHQLLRF
HGAFDLVIIDELDAFPYHNDPMLAYAAEKCCKPEGRFILLSATPPKPIQRDAASKRMPHA
KVPARFHGHPLPVPMHLTVDTVESCLGGRRLPTNLMKTLNQSVARGAQIFLFVSRIRHIE
PLVHLIRISLGGRIPVDGTSSKDELRADKVLAFRSGQIRVLITTTILERGVTVPRSDVFI
LDADSGLFDEASLVQMAGRAGRSKEDPNGKVIFASPQWTASQRGAIRQIKHMNKIAMKNG
YLNARTNER
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgtatgtactgaaagagaaggactctcagcctgtctggttgtgggcgaaggagcgagga
tacagtcctgccgggagggacctttgcttcggggaggagccttactggaaggacttcggt
catgctctcgaagctgcgagactgctcgcctgggctcttcaagggcgctcgctgcttgtg
cctgagctgaagcagctgctggagagccgtctgccacagcttgcggacggctggcgggga
gctgcgcagctggcacatctgcgcggcgaagtgcagctcacatccggcgtggctccggcc
gtccgccgcagcctgctgcgccgcgggcagcccccgcgctgccgccgctgcggaagcgcc
gcgctcaccgcggcaccctgcgcctcgtgcggcagcccggcctgcgcctactgcgcggcc
tgcctcgccctcgggcgcagccgggcttgcgcgctgctgctgcgcggcgcgccggagacg
gccgcggttcaccgcgcggccggccgggaagcccccaccggtgctgcgcttgaccggtgg
gggctcagctctgcgcagcgcgaggcggcatacgccgcgctgcggttcttggctgagcgg
cctgccgggggcgaccgctcagcagggcggcggcaggtctgcgggccgccgcggttcctg
ctctgggcggtcaccggcgcaggcaagaccgagatgatctttccactgctgcgccatgtg
ctggatcagggcggacgcgccttggtagctacgccaaggcgggatgtggtgctggaattg
gcgccgcggatcgccaaggcttttccggatgagccagtggctatactctacggaggaagt
tcccataggtgggaagagagccggctggtgctggcaacaacacaccaattgcttcgcttt
cacggcgcgtttgatctcgtcattatcgatgaactggatgcgttcccgtatcataatgac
ccaatgctggcctacgccgctgagaaatgctgcaagccggagggacggttcattcttctg
tcggcaaccccaccgaagccgatccagcgggatgccgcttcaaagcgtatgcctcatgcc
aaggttcctgcgcgttttcatggacatccgctgcctgtgccgatgcaccttacggtagat
acagtggagagctgcctaggcggcagacgattacctacaaaccttatgaaaaccttgaac
caatctgtcgccagaggcgcccagatcttcctgtttgtctcacggatccggcatatcgaa
ccactggttcacttgatccgcatatcgctgggaggcagaattccggtagatggcacctcc
tccaaggatgaactgcgggccgacaaagtgcttgcctttcgctcaggccagattcgcgta
ctaattacaaccacgatcttggagcgaggggttactgttccgcgcagtgatgtgtttatt
ctggacgcggacagtgggctcttcgatgaagcttcccttgtgcagatggcgggtagggca
ggacgttccaaggaggatccgaatggcaaggtcatcttcgcctcgccgcagtggacagcc
tcccagcggggagcaattcgccaaattaagcatatgaacaaaatagccatgaagaatgga
tacttaaatgctagaacaaatgaacgataa

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