Paenarthrobacter sp. YJN-5: HMI59_08035
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Entry
HMI59_08035 CDS
T10115
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
payj Paenarthrobacter sp. YJN-5
Pathway
payj00300
Lysine biosynthesis
payj00470
D-Amino acid metabolism
payj01100
Metabolic pathways
payj01110
Biosynthesis of secondary metabolites
payj01120
Microbial metabolism in diverse environments
payj01230
Biosynthesis of amino acids
Module
payj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMI59_08035 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMI59_08035 (lysA)
Enzymes [BR:
payj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HMI59_08035 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QOT16557
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Position
1687131..1688603
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AA seq
490 aa
AA seq
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MTTKASHASPLAPEWLAVPEDLNALQEPLWAAGVGRAAEGEVAIDGITVSELKEQFGTPL
FVMSETDFRVRARGFKDAFDAAFADICGGVDVYYAGKSFLCTAVAQWVAEEGLRLDTCSG
GELAVAARAGIPGSKLSLHGNNKSDAEINRALDMKVGRIVVDSLDELQRIARIASGRGEA
AKIMLRLTPGVHAHTHEFIATAHEDQKFGLSMAGDTTGEAGLSAAEEAVAAAVSAPGIEL
LGLHCHIGSQIFEPDGFALAAQKLLAFQAAMQGKYGIVMPELDLGGGYGIAYTPVDTPRP
AAEIAEAMAAVVRATCAELGMEAPRISIEPGRAIVGSTTFTLYEVGTLKTVRVDSGNGQD
GDGNVTYPRRYVSVDGGMSDNPRPVLYDADYSAVLASRGSVEEPQLSRVVGKHCESGDIV
VRDVYLPADVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGAARLIVRGETEEDL
LNRDMGVANV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaggcttcacacgcgtccccgcttgctccggagtggctcgccgtgccggag
gatttgaacgccctgcaggaacccctgtgggcggcgggcgtcggccgtgctgcggaaggc
gaggttgccattgacggtattaccgtcagcgaactgaaggaacagttcggcacaccgctc
ttcgtcatgagcgaaacggacttccgcgttcgcgcacgcgggttcaaggacgccttcgat
gcggctttcgcggacatttgcgggggagtggacgtttactacgccggcaagtccttcctg
tgcacggccgttgcccagtgggttgcggaggagggcctccgcctggatacctgctccggc
ggtgaactggcggttgctgccagggccggaattcccggcagcaagttgagcctgcacggc
aacaacaagtccgacgccgagatcaaccgcgcgttggacatgaaggttggccgcatcgtg
gtggacagcctcgatgaactccagcggatcgcgcggattgcctccggacgcggagaagca
gccaaaatcatgctgcgactcactcccggggtgcacgcacacacgcacgagttcattgcc
accgcccacgaagaccagaaattcggcttgtcgatggccggggacaccaccggtgaagca
gggctgtctgcggcggaagaagcagtcgccgctgcggtctccgctcccggcattgaactg
ctgggcctgcactgccacatcggttcgcagatcttcgaaccggacggattcgccctggcg
gcgcagaagctgctcgccttccaggccgccatgcagggcaagtacggcattgtcatgccg
gaacttgatcttggcggcggttacggaatcgcctacacgcccgtggacaccccgcggccc
gcggcggagatcgcagaggcaatggccgccgtcgtccgcgctacgtgtgccgaactcggc
atggaagccccgcggatttccatagagcccggccgggccatcgttggcagcacaaccttc
accctgtacgaggtgggtacgctcaaaaccgtccgcgttgattccggaaacggccaggac
ggggacggaaacgttacgtatccgcgccgttatgtgtcggtggacgggggcatgagcgac
aacccccgcccggtgctgtacgacgcggattattcggcagttttggcgtcccgcggctct
gtggaggagccgcagctgtcccgcgtagtgggcaaacattgcgagagcggcgacatagtt
gttagagatgtatatctgcccgcggacgtggcagccggtgatttgctcgcagtaccgggt
accggcgcctactgctgggccctctccagcaactacaactaccttgcccggccgggcgtc
gtcgcagtgcgcgatggggccgccaggctgattgtccgcggggaaaccgaagaagatctc
ttgaaccgcgacatgggagtggcgaatgtctga
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