Paenarthrobacter sp. YJN-5: HMI59_10330
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Entry
HMI59_10330 CDS
T10115
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
payj Paenarthrobacter sp. YJN-5
Pathway
payj00750
Vitamin B6 metabolism
payj01100
Metabolic pathways
payj01240
Biosynthesis of cofactors
Module
payj_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
HMI59_10330 (pdxS)
Enzymes [BR:
payj01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
HMI59_10330 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
NMO
IMPDH
Glu_synthase
Trp_syntA
DHO_dh
TMP-TENI
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
QOT16949
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Position
2156965..2157891
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AA seq
308 aa
AA seq
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MSTPDVSNEAGSSANSVTGSNRVKRGMAEMLKGGVIMDVVNVEQARIAEDAGAVAVMALE
RVPADIRAQGGVSRMSDPDMIDQIIAAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEV
LTPADYINHIDKWNFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATGHMRK
IRAEIAKLSSLPEDELYVAAKELQAPYELVKEVAATGKLPVVLFTAGGIATPADAAMMMQ
LGADGVFVGSGIFKSGNPAQRAAAVVKATTFHDDPDVIAKVSRGLGEAMVGINVDEIPEP
HRLAERGW
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacaccagatgtaagcaacgaagccggttcgtccgcgaacagcgtcacgggcagc
aaccgcgttaagcggggtatggctgagatgctcaagggcggcgtcatcatggacgtcgtt
aacgtcgagcaggcccgtattgccgaggacgccggcgccgtcgccgtgatggcccttgag
cgtgttcctgctgatatccgcgcccagggcggcgtgtcccgtatgtccgatccggacatg
atcgatcagatcattgccgcggtgtccatccccgtgatggccaaggcccgcatcggccac
ttcgtcgaagcgcaggtcctgcagtcgttgggcgtggattacattgacgagtccgaggtc
ctgaccccggccgattacatcaaccacatcgataagtggaacttcaccgtcccgttcgtg
tgcggtgccaccaatctgggtgaggcgctgcgccggatcaatgagggtgcggcgatgatc
cgttccaagggcgaggccggcacgggggatgtttccaacgccaccgggcacatgcgcaag
atccgcgcggagatcgcgaagctctcttccctgcctgaggatgaactgtacgttgcggcg
aaggaactgcaggccccgtacgagctggtcaaggaagttgctgccacgggcaagcttccg
gtggtgctgttcaccgccggcggtatcgcgactccggctgatgctgcgatgatgatgcag
ctcggcgctgacggtgtgttcgtcggttccggtatcttcaagtccggcaacccggcccag
cgtgccgccgccgtcgtcaaggcaaccacgttccacgatgacccggacgtgatcgcgaag
gtctcccgcggcctcggcgaggcgatggtcggcatcaacgtcgacgaaatccccgaaccc
caccgcctggccgaacgcggctggtaa
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