Paenarthrobacter sp. YJN-5: HMI59_10985
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Entry
HMI59_10985 CDS
T10115
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
payj Paenarthrobacter sp. YJN-5
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
payj03051
]
HMI59_10985 (pafA)
Enzymes [BR:
payj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HMI59_10985 (pafA)
Proteasome [BR:
payj03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HMI59_10985 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QOT17070
LinkDB
All DBs
Position
complement(2299809..2301173)
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AA seq
454 aa
AA seq
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MDKRIFGIETEFGISYSSPDSRPLAPEEVARYLFRKVVSWGRSSNVFLTNGSRLYLDVGS
HPEYATAECDDLAQLIAHDRAGELILDDLVDEAQARLAAEGFNGTVYLFKNNTDSAGNSY
GSHENYLIPRRGEFSRLAEILIPFLVTRQLIAGAGKVLKTPHGATFAFSQRADHIWEGVS
SATTRSRPIINTRDEPHADAEFYRRLHVIVGDSNMSETSALLKVGTVDLILRMIEAGVIM
RDMRMENPIRSIREISHDLSGRALVRLANGRQLSALDIQREYLAKVTEFVAANGAHNPHV
PLIIDLWTRTLDAIESGNSSSIDTEVDWAIKKKLMEGYMKRHDIGLDSPRIAQLDLTYHD
ISRQRGLFFLLQSRGAARRLVTETEVKDAVDAPPQSTRAKLRGDFVRRAQELGRDYTVDW
VHLKLNDRAHQTILCKDPFRSVDERVDALLDSMS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcggatattcggcatcgaaactgagttcggaatctcatattcgagccctgat
tccaggcccttggcgccggaagaggtagcaaggtacctcttccgcaaagtagtcagctgg
ggcaggtcttccaacgtcttcctgaccaacggttcacggctgtacctggacgtcggctcg
catcccgaatacgccacagccgagtgcgacgatcttgctcagttgattgcccatgaccgc
gccggggaactcatcctggacgacctcgtggacgaggcccaggcgcgcctggccgccgaa
ggtttcaacggaaccgtgtacctgttcaagaacaacacggactcggcaggaaactcctac
ggcagccacgagaactacctcataccgcggcgcggtgagttctcccggttggccgagatc
ctgattccctttctggtgacgcggcaactgatcgccggcgcgggcaaagtgcttaagacc
ccgcacggggccaccttcgccttctcccagcgggcggaccacatttgggaaggcgtctcc
tcggccaccacaaggtcccgccccatcatcaatacccgtgatgagcctcacgcggacgcc
gagttctaccgccgtctgcacgtcatcgtgggcgattcgaacatgtcggagacgtccgca
ctgctcaaagtgggcacagtggacctgatcctccgcatgattgaggcgggcgtcatcatg
cgcgacatgcgcatggaaaaccccatccggagcatccgcgaaatttcccatgacctcagc
ggcagggcgctggtccgcctggccaacggcaggcagctctcagcactggacatccagagg
gagtacctggccaaggtcacagagtttgttgcagccaacggggcccacaatccacacgtg
ccgttgatcatcgatctttggacgaggacgctcgacgcgatcgagagcgggaacagcagc
agcatcgacaccgaagttgactgggccatcaagaagaaactcatggaaggctatatgaag
cgccatgacattggcctggattcgccgaggattgcccaactcgacctcacctaccacgac
atctcgcggcagcggggcctgttcttcctcctccagtcacggggagcggcacggcgcttg
gtcacggagaccgaggtcaaggatgccgtggacgctccgccgcagtcgacgcgggccaag
ttgcggggagactttgtccggcgggcgcaggaactgggccgcgactacaccgtggactgg
gtccatctcaagctcaatgaccgggcgcaccagaccattctctgcaaggatccgttccgc
agcgtggatgagagggtcgacgccctccttgactctatgagctga
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