KEGG   Paenarthrobacter sp. YJN-5: HMI59_11465
Entry
HMI59_11465       CDS       T10115                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
payj  Paenarthrobacter sp. YJN-5
Pathway
payj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:payj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HMI59_11465 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:payj03400]
    HMI59_11465 (uvrA)
DNA repair and recombination proteins [BR:payj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HMI59_11465 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HMI59_11465 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_21 RsgA_GTPase AAA_16 nSTAND1 AAA_22 AAA_25 APS_kinase DnaJ_CXXCXGXG nSTAND3 NACHT Viral_helicase1 cobW ExoX-like_C
Other DBs
NCBI-ProteinID: QOT17159
LinkDB
Position
complement(2403987..2406914)
AA seq 975 aa
MPKALAEDTAVHDMNTVSVAPDAKPVRPDLSRLVVKGAREHNLRNVDLDLPRDAMIVFTG
LSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDKPDVDFIEGLSPAVSIDQKSTS
KNPRSTVGTITEIYDYMRLLWARVGRPHCPVCGEPITRQTPQQIVDQLLELDKGTRFQVL
APVVRGRKGEFVDLFKELTAKGYSRARVDGELVQLSEAPKLGKQFKHTIEVVVDRLVVKE
DIGQRLTDSVETALGLAEGRVLVEFVDLDAKDPARIRAFSENLACPNEHPLAIDEIEPRS
FSFNNPFGACSACSGIGTKLEVDEELIVPNPELSLAEGAIAPWSMGSATAEYWNRLLEGL
ASELGFSMNTAWEKLPKDVRNTVLHGKDHKVVVQYRNRFGRERKYSTGFEGAIQYVHRKH
GETDSDWARDRYEEYMRQIPCPECNGARLNPASLSVLINGKSIAEVAALPMRECASFLGN
LTLTGREAQIAHQVLKEIQARLTFLLDVGLEYLNLERPSGTLSGGEAQRIRLATQIGSGL
VGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIHEADWVVDIGPGAG
EHGGQVVHSGTYKELLANTESLTGDYLSGRRKIDVPAKRRKYDKKRELKVVGARENNLNN
VDATFPLGLFTAVTGVSGSGKSTLVNEILYKVLANKLNGAKQVAGRHRTVNGLEHLDKVV
HVDQSPIGRTPRSNPATYTGVFDNIRKLFAETTEAKVRGYLPGRFSFNVKGGRCEACSGD
GTLKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKTIADVLNMPIEEAAEFFAAFTPI
ARHLKTLVDVGLGYVRLGQPATTLSGGEAQRVKLAAELQKRSNGRSIYVLDEPTTGLHFE
DIRKLLMVLQGLVDKGNTVITIEHNLDVIKSADWIVDLGPNGGSGGGRVVATGTPEQVAK
STESHTAKFLAEILG
NT seq 2928 nt   +upstreamnt  +downstreamnt
gtgcccaaagccttagctgaagatacagccgtccatgacatgaacactgtttccgtcgca
cctgacgccaagcccgtacgcccggatctgtcgcgcctggtggtcaagggtgcgcgtgag
cacaacctccgcaatgtcgacctcgatcttcccagggatgcgatgatcgtcttcaccggg
ctctcgggatccggtaagtcgtcccttgccttcgacaccatctttgctgagggccagcgc
cgctacgtcgagtcgctgtccgcctatgcgcgccagttcctggggcaggtggataagccc
gacgtcgacttcatcgaaggcctctcgcccgcggtctccatcgaccagaagtccaccagc
aagaacccgcgctcaaccgttggcacgatcaccgagatttacgactacatgcgcctcttg
tgggcccgtgtgggacgtccgcactgcccggtctgtggtgagcccatcacgcggcagact
ccgcagcagattgtcgatcagctgctcgaactcgacaagggcacgcgcttccaggtcctc
gccccggtggtccgcggccgcaagggcgaattcgtggatctcttcaaggagctcacggcc
aagggctattcccgcgcccgggtggatggtgaactggtccagctcagtgaagctcccaag
ctgggaaagcagttcaagcacaccattgaggttgtggtggaccgcctggtggtcaaggaa
gatattggccagcgcctcaccgactccgtggaaaccgcactgggcttggccgagggccgc
gtactggtcgagttcgttgacctcgatgccaaggaccccgcacggattcgcgctttctcc
gagaacctggcatgccccaacgagcatccgctggctattgacgagatcgaaccccgctcc
ttctccttcaacaaccctttcggcgcctgttctgcctgcagcggcatcggtaccaagctt
gaggtggacgaggaactgatcgttcccaacccggaactctccttggccgagggcgccatt
gcgccgtggtcgatgggcagtgccaccgcggagtactggaaccggctcctggaaggtctt
gcctcggagctgggcttctccatgaatacggcctgggaaaaactgccgaaggacgtccgc
aacacggtcttgcacggcaaggaccacaaagtggttgtgcagtaccggaaccgctttggc
cgtgagcgcaagtacagcaccggcttcgagggcgccatccagtatgtgcaccgcaagcac
ggcgagacggactccgattgggcgcgggaccggtacgaagagtacatgcgccagattccg
tgtcccgagtgcaacggtgcccgcctcaacccggcatccctctcggtgctcatcaacggc
aaatccatcgccgaagtcgctgcgctgcccatgcgggagtgcgcttccttcctcggcaac
ctgacgctcaccggccgtgaagcgcagattgcgcaccaggtcctcaaggagatccaggcc
cgcctgacgttcctcctggacgtcggcttggagtacctgaacctggagcgcccgtccggt
accttgtccggcggagaggcccagcgtatccgtctggccacgcaaatcggctcgggattg
gtgggcgtcctctacgtattggatgagccgtccatcggactccaccagcgcgacaacagg
cgcctcatcgaaaccctgacccggctgcgggacctcggcaacaccctcattgtggtggaa
cacgacgaagacaccatccatgaggccgactgggtagtggacatcggaccgggcgcaggt
gagcacggtggccaggtggtccactcgggcacctacaaggaactgttggcgaacacggaa
tccctgaccggtgattacctgtccgggcgccggaagatcgacgtccccgccaagcgccgc
aagtacgacaagaagcgtgagctgaaggtcgttggggcacgcgaaaacaacctgaacaac
gtggacgcgaccttcccgctgggcctgtttactgccgtgacgggcgtcagcggctccgga
aagtccaccctggtcaacgagatcctttacaaggtcctcgccaacaagctcaacggtgcc
aagcaggtagccggaaggcaccggacagtgaacggcctggagcacctggacaaggtggtc
cacgtagaccagagccccatcggccggaccccccggtccaacccggcaacctacaccggg
gtcttcgacaacatccggaagctcttcgcggaaacaacggaagccaaggttcgtggctac
ctgcccgggcggttctccttcaacgtcaagggcggccgctgcgaagcctgctccggagac
ggcacgttgaagatcgaaatgaacttcctgccggacgtgtatgtgccctgcgaggtctgc
catggtgcccgctacaaccgggaaacgctggaagtgcactacaagggcaagaccatcgcc
gatgtcctcaacatgccgatcgaggaagctgccgagttctttgcggcgttcactccgatc
gcccggcatttgaagaccttggtggacgtcggcctcgggtatgttcgccttggccagccg
gccaccaccttgtcgggcggcgaagcgcaacgcgtgaagctggcagccgagctccagaaa
cgctccaacgggcgcagcatctacgtgttggatgaacccaccaccggcctgcacttcgag
gatatccggaagctcctcatggtccttcagggcttggtggacaagggcaatacggtgatc
accatcgaacacaacctggacgtgatcaagtccgccgactggatcgttgacctcggtcca
aacggtggctccggaggcggccgggtggtggccacgggcacgcccgagcaggtggccaag
tcgaccgagagccacacggcaaagttcctggccgagattctcggttaa

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