Paenarthrobacter sp. YJN-5: HMI59_14660
Help
Entry
HMI59_14660 CDS
T10115
Name
(GenBank) cadherin-like domain-containing protein
KO
K20276
large repetitive protein
Organism
payj Paenarthrobacter sp. YJN-5
Pathway
payj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMI59_14660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
fn3
Cadherin_4
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
QOT17729
UniProt:
A0A7M2C4A0
LinkDB
All DBs
Position
complement(3111842..3117973)
Genome browser
AA seq
2043 aa
AA seq
DB search
MAPSRRPAQRAPKRQSSRKRHARILGVTAFTAAAAVLVTGAILYPGFKTTEVDLNDGGVW
VVSKSKNAAGRLNYPSKSLDGAVTPASDDFEILQQASDIFIDDAGGATINPVSAANMRLG
GDQQLPGAAHVSFGSKVLAVTDSAKGKVWAVSPTSLGGFSDESTPLFEQSQGITSVVGTD
DTIHTLDPKAGKLTATTVDADGNVVDSQVRSDDSLKADGDVQLTAVGGKAVVLNQANGNI
ILPGGSVVHLADARDAKLQQAGPEAGTVAIATKDALLLQPLDGGTATTVRADGQGTPAAP
VHVGTCTYGAWSGANKYVRECSNEADNRRADVPQASASPSYVFRVNRDLVVLNDVNSGNV
WMVNQNMQLVNNWDDVIPPQQTSDDADKDSADEVQQTVLPDRSKPNTPPVAKPDSFGVRA
GKTTILPVLDNDADSDGDVLTVSAAEPLKSGALSPVYGGTGFQIAVPAGTTGTETFKYSV
DDGRGGTAATEVDLRVVPPEENNAPQPKPNRNNTLVVQAGKIANQYILTDWIDPDGDDIF
AVSASSSDPADQVRIRPDGLLTFQDSGTGPGRKTITVTVSDGTDSTDGQVVVDVRAPGAL
PPIANADHVVAVAGQDTVIAPLKNDTDPQGGTLRLAQAQPDGQSTAVIGPDQQTFTFNSG
AVGAHYVTYMVTNGPASAQQLVRVDVVSGNSDDAPVAVRDIALLPSGGSTVVDVLGNDSD
PAGGVLVVQSVTAVDGLPVSVAVLDHSVVKITDIRAEGQLSLKYTISNGKASATGDISVQ
VVPAPTKLQAPQAKPDDVTVRAGDVVTIPVLENDADPNGGELTLDPVLAQQPDEADGRMF
VAGKTLRFIAGEEAKTVYAIYKVTNASGQSDSQQVTIRIRARDDATNTRPEPKNLTARAV
AGMTVKIPVPLDGIDADGDSVQVIGIDKAPSLGTAVLRDGYLEYTAGGKSAGTDTFSYRV
KDRIGAENTGNVIVGIAPAEADNQKPIAVDDAIDVRPGRRVAVDVLNNDSDPDGDPIGLV
PTFDAKPGLEVEAVAGKAVLTAPGTAGVESIGYRIQDDKKAEASAVIRVQTSPSAPLHAP
IAVDDHVTLAETLGKTAVDVPVLKNDSDPDGVAEDLKISLPDGNPNARVGTSGNVVVTLA
PQDQLIPYTVTDIDGQTATAVMWIPGQGLQYPTLSKTDVVEVTAGKEVTLSLKEWVKVRD
GRSPRITVADKIKVQGGDPLNVIAGDGGALRYAAQADYVGPGSVTFEVTDGSGPDDPEGL
KSTLTIMTKVLPDPNANHPPTFSGAVIDAPQGDVTELDLSNLAGDVDEQDQGKLKFEFDG
QQPGGFEARIDGTVLKITPGGSLNPGARGVVPLKVTDGRSDPVRAAVTVTVVSSNRPKPV
ANDDAVEKADAGKPQTVNVLGNDFNPFSEPLGIVSAVVEMGSAGQPEISGDSITVTPSAG
SKGVLVVRYTIKDKTDDPSRQAVGRVRITVRDKPDAPSAPAATDVRSRTAVLKWAPPSDN
GAVITKYTVKAAGFQQECPTTTCTLTGLTNNVSYVFTVTATNEVGESGASPASNEIKPDE
KPSPPDAPAVKAGDKDLAITWTPAKTEGSPVKHYNLEISPPPGNGVAVKNEVTGLSYTWT
GLTNGVNYKVRAQAVNELGPSDWSLYSAEDHPAGLPGAPAAPTTAVVSSVGSQNQLRADW
TEPDINGDPIKNYYVTMSGGSGATQTQTVPGNTRTATFTANNSESGYTFTVQAENKAGKG
AVSAASAPRRATGKLGTVGNVSATPANTGGAGGQLTINFTVLNQAQRNGSSANEVSYTYR
ASTGQSGPIQPGQTVGGFANGQAISITVTAQSSVAPSSDASAPATATPYGSPGTPSASGT
NGAMNDPSVTLNWSSPSTSTNDVKTTKIRINGGAWETVAASGSRTINTGGYEQTRTIDVQ
TFNSLGTGGPVASASATSGKKGEWTTTMNPGAVERSCSYTLGGANYDPNRFTCDGKGGNQ
PPWMYTSDQGKIVVRCYIDQSDGWVGMQRWWRIESGSYRNVGRYIIAGHTYLGDPAGIGA
PRC
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atggctccgagcaggaggcccgcccaacgagcgcccaagcggcaatcatcacggaagcgg
cacgccaggatcctgggtgtcaccgccttcacggcagctgcggctgtgcttgtaaccgga
gccatcctctacccgggtttcaaaaccaccgaggtggacctcaacgacggcggcgtctgg
gttgtcagcaaatcgaagaacgccgccggccggctgaattacccttcaaaatccctcgac
ggtgccgtcactccggccagcgacgacttcgagatccttcaacaggcaagcgacatcttc
attgacgacgccggcggggcgacgatcaacccggtcagcgccgccaacatgcgcctgggc
ggggaccagcagcttccgggagcggcccacgtcagcttcggcagcaaagtcctggccgtc
actgattcagccaagggcaaagtgtgggccgtttcgcccacctccttgggcggcttcagc
gatgaatccacgccattgttcgaacagtcccaaggcatcacgtccgttgtggggacggac
gacaccatccacaccctggaccccaaagcagggaagcttaccgccaccacagtggatgcg
gacggcaacgtcgtcgactcgcaggtccgctccgacgattccctcaaagccgacggcgac
gtgcagctcacggccgttggcggcaaggcggttgtgctgaaccaggccaacggcaacatc
atcctgccgggcggttcagtggtccatctcgccgatgccagggacgccaagctgcagcag
gccggtccggaggccggcaccgtggccatcgccacgaaggatgccctgttgctgcagccc
ttggacggcggcacggccacaaccgttcgtgccgacgggcaagggaccccggcggcgcct
gtccatgtgggtacgtgcacttacggggcgtggtccggggccaacaagtacgtccgggag
tgcagcaatgaagccgacaaccgccgcgccgacgtgccccaggcgagtgcgtcgccgtcg
tacgttttccgggtcaaccgcgacctcgtggtcctcaacgacgtcaactcgggcaacgtc
tggatggtcaaccagaacatgcagctggtgaacaactgggacgatgtcattccgccccag
cagacctcggacgatgcagacaaggactccgccgacgaagtccagcaaacagtccttccg
gatcgcagcaagccgaacaccccgccggtggccaaacccgattccttcggagtgcgcgcc
gggaagaccaccatcctgccggtactggacaatgatgccgattccgacggcgacgtcctg
accgtcagtgcggccgaaccgctcaaatcgggagcattgtccccggtttacggggggacg
ggtttccagattgcggtgccggccggcaccacaggcaccgaaaccttcaaatactccgtg
gacgacggccgcggaggaaccgctgccaccgaggtggacctgcgggtggtgccgccggag
gaaaacaacgcgccgcagcccaagccaaaccgcaacaacacgctggtggtgcaggccggc
aagatagccaaccagtacatcctgacggattggatcgatcccgacggcgacgacatcttt
gccgtgtcggcctcgagcagcgatcctgccgaccaggtccggatcaggcccgacggcctg
ctgactttccaggattccggaaccggtcccggccgcaagaccatcacggtgacggtgtcg
gacggcaccgacagtaccgatgggcaggtcgtcgtggacgtccgcgcccccggagccctg
ccgcccatcgccaacgctgaccacgtcgttgcggtggccggccaggacaccgtgattgcg
ccgctcaagaacgacaccgatccccagggcggaacgctccgcctggcgcaggcccaaccc
gatgggcagtccacggcggtcatcgggcctgaccagcagacgttcacgttcaactccggt
gccgtaggcgcccactacgtgacctacatggtgacgaacgggccagcgagcgcgcagcag
ttggtccgggtagacgtggtctcgggaaacagcgatgacgcgccggttgccgtgcgggat
attgccctcctgccgagcggaggcagcacagtggttgatgtcctcggcaacgactcggac
ccggctggaggcgtgttggtggtgcagtcggtgacggccgtggacggcctgcccgtcagc
gtggccgtactggaccactcggtcgtgaagatcactgacatccgcgccgaaggccagctg
tcgctgaagtacaccatctccaacggcaaggcttctgcaaccggtgacatctcggtccag
gtggtgccggcgcccaccaagctccaggcgccgcaggcaaagcccgacgacgtcacggtg
cgggcaggcgacgtggtgaccatcccggtgctggaaaatgatgcggatcccaacgggggc
gaactcaccctggacccggtcctcgcacagcagccggacgaggcggacggccggatgttc
gtggccggcaagaccctccgtttcattgccggagaagaggccaagaccgtctacgcgatc
tacaaggtcaccaacgcttccggccaatcggattcccaacaggtcaccatccggatcagg
gcccgggacgacgccaccaacacccggccggagccgaagaacctgacggcccgtgcggtg
gcgggaatgacagtcaagatccctgttccgctggatggcatcgacgccgacggagactcg
gtccaggtgatcggcatcgacaaagccccgtccctggggaccgccgtactccgcgacggc
tacctggagtacacggccggcggtaaatcggcggggaccgacaccttcagctaccgcgtg
aaggaccgcatcggcgcggaaaataccggcaacgtcattgtcggtatcgcgccggcggaa
gcagacaaccaaaagccaatagcagtggatgacgccatcgacgtgcgtccagggcggcgc
gtcgccgtcgatgtcctcaacaacgattccgaccccgacggcgaccccatcggcttggtg
ccgacgttcgatgccaaacccgggctggaggtcgaagccgttgccggtaaagcggtgttg
accgcgccgggtaccgccggcgtggagagtatcggctaccggatccaggatgacaagaag
gccgaagcaagtgccgtgatccgcgtccagaccagtccgtcggccccgctgcatgcaccg
atcgccgttgatgaccatgtgaccctcgcggagacgttggggaagaccgcggtggacgtg
cccgtcctgaagaatgattccgatcctgacggggtagccgaagacctcaagatctccttg
cctgacggcaaccccaacgcccgtgtgggcacctcgggaaacgtggtggtcacgctggcg
ccccaggaccagctcattccgtacacagtgacggacattgacggccaaacggccacggct
gtcatgtggattcccggacagggcctccagtacccgaccctttccaagaccgacgtcgtg
gaagtcaccgcgggcaaggaagtgacgctgtcactgaaggagtgggtcaaggtccgtgac
ggccgcagcccgcggatcacggtggcggacaagatcaaggtccagggcggtgacccgctg
aatgtcattgcgggcgacggcggtgcccttcgctacgctgcgcaggcggactacgtgggt
cccggctctgtgacgttcgaggtcacggacggttccggtcccgacgatcccgaggggctg
aagtccacgctcaccatcatgaccaaggtcctgccggatcccaatgccaaccatccgccg
accttcagcggtgccgtcatcgacgctccgcagggcgatgtcaccgaactggacctgtcg
aacctcgccggcgacgtggatgagcaggaccagggcaaactgaagttcgaattcgacggc
cagcagcccggcgggttcgaggcccggatcgacggcacggtcctgaaaatcacgcccggc
ggatccctcaacccgggcgcacgcggcgtggtgccgctgaaggtgaccgacggccggtcc
gatccggtccgtgcggccgtgaccgtcacggtggtgtcctccaaccggcccaaaccggtg
gccaacgacgacgccgtggagaaggccgatgccggcaagccgcaaaccgtcaatgtgctc
ggcaatgacttcaatccgttcagcgagccgttgggcatcgtgtccgcggtggtggagatg
ggttcagccgggcagcccgaaatctcgggcgactccatcacggtgacgccgtccgcgggc
tcaaagggcgtgctggtagtccgctacaccatcaaggacaagactgacgatccgagccgc
caggcagtgggccgcgtccgcatcactgtccgggataagcccgatgctccttccgcgcct
gctgccaccgatgtccggagccgcaccgccgtcctcaagtgggccccgccgtcggacaac
ggcgcagtcatcaccaaatacaccgtgaaggctgcgggattccaacaggaatgccccacc
accacctgcaccctgacggggctcaccaacaacgtgagctacgtattcaccgtgacggcc
accaacgaggtcggagagtccggtgcgtcgccggcttccaacgagatcaagcctgacgaa
aagccgtccccgccggacgctcccgccgtgaaagccggggacaaggacctggccatcacg
tggacccccgcgaagaccgagggctcacccgtcaagcactacaaccttgagatttccccg
cccccgggcaacggagtggcggtcaagaacgaggtcaccggactctcctacacctggacc
ggactcaccaacggagtcaactacaaggttcgggcccaggcggtcaacgagctcggacct
tccgactggagcctgtactccgccgaagaccacccggccggtctccccggcgccccggcg
gcgcccaccaccgccgtcgtgtcttccgtgggttcgcagaaccagctccgggctgactgg
acagagccggacatcaacggcgaccccatcaagaactactacgtcaccatgagcggcggc
agcggcgctacgcagacgcagaccgttccgggcaatacccgtacagctaccttcacggcg
aataactcggaatccggctacacgttcactgttcaggccgagaacaaggccggcaagggt
gcggtcagtgcggcctctgctccacggcgggcaaccggcaagctgggaaccgtgggcaac
gtcagtgccacaccggccaacaccgggggagcaggcggccagctcaccatcaacttcaca
gtgttgaaccaagcccaacgcaacggttcaagcgccaatgaagtcagttacacctaccgc
gccagcaccggccagtccggccccatccaaccggggcagaccgttggaggtttcgccaat
ggccaggccatcagcatcacggtgactgcccaatcttccgttgcaccgagctcggatgcg
agtgctcccgctacggccacgccgtatggttcgcccggaacgccgtcggcatcgggaacg
aacggtgcgatgaatgatccctcggtcaccctcaattggtcctcgccctcaacatccacc
aatgacgtcaagaccaccaagatcaggatcaacggcggcgcgtgggagacggttgcggca
tccggcagccggactatcaataccggcggctacgaacaaacacggaccattgacgtgcag
accttcaactccctgggtaccggtgggccggtagccagcgccagcgccacatccggcaag
aagggggaatggaccaccaccatgaaccccggtgccgtggaacgatcctgcagttacacc
cttggtggagccaattacgatccaaacaggttcacgtgtgacggcaagggcggcaaccag
ccgccatggatgtacacctcggatcaagggaagattgttgtccgttgctacatcgaccag
tcggatggctgggtgggcatgcagcgttggtggcgcattgaatcaggctcctaccggaac
gtaggccggtacatcattgcaggtcacacctatctgggtgatccagcaggcatcggagcg
ccccgatgctga
DBGET
integrated database retrieval system
