Paenarthrobacter sp. YJN-5: HMI59_17735 Help Entry HMI59_17735       CDS       T10115                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism payj  Paenarthrobacter sp. YJN-5 Brite KEGG Orthology (KO) [BR:payj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:payj03400]     HMI59_17735 Enzymes [BR:payj01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      HMI59_17735     5.6.2.6  RNA 3'-5' helicase      HMI59_17735 DNA repair and recombination proteins [BR:payj03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     HMI59_17735 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_4th_Lhr WHD_2nd_Lhr WHD_3rd_Lhr DEAD Helicase_C AlkZ-like ResIII DUF6406 MarR_2 AAA_22 EutK_C HTH_24 Motif Other DBs NCBI-ProteinID:  QOT18254 LinkDB All DBs Position 3823941..3828956 Genome browser AA seq 1671 aa AA seqDB search MQEQQASTGAMSRFSQATREWFLGAFSEPTAAQDGAWNAISSGSHALVVAPTGSGKTLAA FLWALDRLHAAPSDALPGFEEVPAPAKGRAKRPKTKTRVLYISPLKALGVDVERNLRAPL IGITQTAKRLGLPAPLVTVGVRSGDTTAADRRSLLSNPPDILITTPESLFLMLTSRARET LSEVDTVIIDEVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVQPRELVAQFLAG QAPVEIVAPPSKKNWNLTVTVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEQIVD LVLSKQSTIVFANSRRLSERLTARLNEIYAERQLMAEAGSPWAEPAAGNTEDWGAGDDAV VASPVKAPVSTATPAHMMAQAGSTSGSDPVLARAHHGSVSKDQRAMIEDDLKSGRLRCVV ATSSLELGIDMGAVDLVIQVESPPSVASGLQRVGRAGHQVGEISEGVLFPKHRADLLHTS VTVERMLSGQIERLSIPTNPLDILAQQTVAATALGSIDVEEWFSTVRRSAPFASLPRSAF EATLDLLAGRYPSDEFAELRPRIVWDRHAGTIEGRPGSQRLAVTSGGTIPDRGLFGVYII GTEVEGTGSSGGSDSDGPSPSARAAKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDI THDRVLVSPAFGQPGKLPFWKGDSLGRPVDLGRALGAFIRELSAADSGPAMERCQASGLD TFAANNLIQYLEEQKQATEVVPSDRTLVVERFHDELGDWRVVLHSPFGMPVHAPWALAVG QRLQQRYGLDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFAS RFRECAARALLLPRQNPTKRQPLWQQRQRSAQLLDVAKKYPSFPIVLETVRECLQDVYDL PALKDIAASVERRELRIVETTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDS TLLNELLGRVELRELLDAAVIDSTERELQRLVPDRRVRGMEGIADLLRLLGPLDVKEVAE RLQGQELVQEQEQLLNQEQFQDHAEDQELTEDKALPPGTPAEAEQHLLALQKTNRALKVT IGGVERFAAIEDAARLRDAIGVPLPMGVPLAFIEPVQDPLGDLVSRYARTHGPFTAAEAA TRLGLGVAVVNTALKRLAADGRVVEGEFRPHAVAATQDPETTDPELMGPEAPPASEWCDA EVLRKLRRRSLAALRAEVEPVDAAAYGRFLPAWQNVSAQGKSRGSALRGLDGIITAVDQL SGVPVPASAWEPLVLASRVADYKPAMLDELMAAGELLWSGAGQLPGNDGWISLHVADSAE LTLNPSPDFEPGDAQQRLLDYLSAGGGYFFRQLTDVAGGMDAVLSDDAVVSALWDLVWAG RVTGDTFAPVRAMIAGGRTAHRQVAKAPRARAPRMSRLGRHGAGLLGSPGLSGGRYGSTA ASAPTPPLAVGRWSALPAPELDPTIHARGTAELLLDRYGVVTRGSVMAENILGGFGLMYK VLARLEEAGRCRRGYFIEHLGAAQFAVPATVDRLRSFTEDARISKAEPLALALAATDPAN PYGAALPWPGVAGEAGSGHRPGRKAGALVVMVDGALVLYVERGGKTLLTFSHDEAALTVA AEALVGVVRRGAVDKLFMEKVNGHDLLETPIAVALAAAGAYSTPKGLRIRA NT seq 5016 nt NT seq  +upstreamnt  +downstreamnt atgcaggagcagcaggcgtccacaggcgccatgagccgtttcagccaggcaaccagggaa tggttcctcggcgctttcagtgagcccacggccgcccaggatggcgcgtggaatgccatt tcctccggctcccatgccttggtggtagcccccaccggttcgggaaagaccttggccgcg ttcctctgggcgttggacaggctgcacgctgccccgtcggatgctttgccgggatttgag gaggttccggcgccggccaagggccgcgccaagcgtcccaagaccaagacccgcgtcctc tatatatcgccgctcaaggctctcggcgtggacgtggaacgcaacctccgcgccccgctg atcggcatcacgcaaacggcaaagcgtttgggcctgcccgcaccgctggtgacggttggc gtccgttcgggagatacgacggcggcagaccgccggtcgctgctgtccaaccctccggac atcctcattacaacgccggaatccctgttcctgatgctgacgtcgcgtgcacgggagacg ctcagcgaagtggacaccgtgatcatcgacgaagtccacgctgttgccggcaccaagcgc ggtgcccatctcgctgtatcgctggaacgcctggacgcgctattgcccaagcccgctcaa cgcatcgggttgtccgccaccgtgcagccgcgcgagctggtggcccaattccttgccggt caggctccggtggagatcgttgctcccccttccaagaaaaactggaacctgacggtcacc gtgcctgttgaggacatgtcggacctccagggtgctgccggcgcgttcgattccgggccg gcttccggattgcagccgcaagcttccatctggccgcacgttgaggagcagattgtggat ctggtcctctccaagcagtccaccattgtctttgccaattcacgtcgcctttcggagcgg ctgaccgcccggttgaacgagatctacgcggaacggcaacttatggcggaggcgggttca ccgtgggctgagccggctgccgggaatacggaggactggggcgccggagatgacgccgtg gttgcgtctcccgtcaaggcaccggtttccaccgcaacccccgcgcacatgatggcccag gcgggcagcaccagcggaagcgatcccgttctggccagggcccaccatggttcagtgtcc aaggaccaacgggccatgatcgaggacgacctcaaatccggcaggctgcgctgtgttgtt gcaacgtcttccctggaactgggcatcgacatgggcgcggtggaccttgtcatccaggta gagtccccgccctcggttgccagcggccttcagcgcgtcgggcgtgccgggcaccaagta ggcgaaatctccgagggcgtactcttccccaagcaccgggccgacctcctccacacgagc gtcacggtggagcggatgctcagtggacagatagagcggctgagcatccccaccaacccg ctggacatccttgcccagcagaccgtcgcggccaccgcgttggggagcatcgacgtcgag gaatggttcagcaccgttcgccgctcggcgccgttcgccagcctcccccggtcagcgttc gaggccaccctggacctcctggcaggccggtacccctccgatgagtttgccgagctgcgg ccccgcatcgtgtgggaccgccatgcgggaaccattgagggccggcccggatcccagcgg ctggcagtcacgtccggtggcaccattcccgaccgcggcctcttcggggtgtacatcatc ggcacggaagttgaagggaccggttcatccggtggctctgacagcgacggcccgagccca tcggcccgtgcagccaagggcggccgccgcgtgggcgagctcgacgaggaaatggtctac gaatcccgggtcggggacgtctttgccctcggagcaacaagctggaaaatcgaggacatc acgcacgaccgtgtcctcgtctcccccgccttcggccagccgggcaaattgccgttctgg aagggtgactccctgggccgcccagtggaccttggacgtgcactgggcgcgttcatccgg gaactttcggcagctgactccggcccggccatggaacgctgccaggccagcggcctggac acctttgcggcaaataacctgattcagtacctcgaggaacagaagcaggccaccgaggtt gtgcccagcgaccgaacgctggtggtggaacgcttccacgatgaactgggtgactggagg gtggtccttcacagccccttcggcatgccggtccacgcgccgtgggcccttgctgtgggt cagagactccagcagcgttacggcttggacggatcggcaatggctgccgatgacggcatt gtgctcagggtacccatgatggaagacgaacctcccggcgcggagctgttcctcttcgat ccggaggaactggaacaaattgtcaccgcagaggttggcggcagcgctctcttcgcgtcg cgtttccgggaatgcgctgcccgggccttgctgctgccgcgtcaaaaccccaccaaacgg caaccgctgtggcagcaacgccagcgttccgcccagctgctggacgtcgccaagaagtac ccgtcgttccccatcgtgctggaaaccgtgcgcgaatgcttgcaggacgtctacgatctc ccggcgctcaaggacatcgcagcctccgtggaacgcagggaattgcggatcgtcgaaacc actacgcagcagccatctcctttcgccaaatcactgttgttcggctatgtcgcccagttc ctctatgagggcgactcccccctggccgagcgcagggctgcggcactggccctcgactcc accctcctgaacgagctcctaggcagggtggaactccgtgagctcctggacgcggcagtc atcgattccaccgagcgggagctgcaacggctggttccggatcgtcgggttcgtgggatg gaaggcattgcggacctcctccggctcctgggtccgctcgacgtgaaggaagtagccgag cgtctgcaagggcaggaactggttcaggagcaggaacagctgctgaaccaggaacagttt caggaccacgcggaggaccaggaactcaccgaagacaaggctcttcctcccggaactccc gccgaagcagagcagcaccttttggcattgcagaagaccaaccgcgccctcaaggtgact atcggcggcgtcgaacgctttgctgccattgaagatgcggcgcggcttcgcgatgcaatc ggcgttcccctccccatgggtgtgccgctggcctttatcgaacccgtgcaggacccgctg ggagacctcgtttcccgttacgcccgcacgcatggaccattcactgcggccgaagcggcg acgcggctgggactgggcgtcgccgtcgtcaatactgccctgaagcggctggctgcagac ggcagggttgtggagggtgagttccgaccccacgccgtcgccgcaacccaggaccctgaa accaccgatcccgagttgatgggcccggaagctcctcctgccagcgaatggtgtgacgcc gaggtcttgcggaaattgcggcgccgctccctcgctgcgttgcgggcggaagtggaaccg gtggacgccgccgcttacggtcgcttccttcccgcatggcaaaacgtcagtgcccaagga aagtcgaggggctcggccctgcggggtctggatggcatcatcactgccgtggaccagctg tccggggttcccgtcccggcatcggcttgggaaccgctggtgctggccagcagggtggcc gactacaaacctgcgatgctcgatgaactcatggcagcgggggaactgctctggtccgga gccggtcagttgcccggcaatgacggatggatcagccttcatgttgcggactccgccgag ctgaccctgaatccctcgccggacttcgaacccggcgatgcccagcaacgcctgctggac tatctgagtgccggcggtggctacttcttccgacaactaacggacgttgccgggggtatg gacgccgtgctcagtgacgacgccgtcgtctcagcgctgtgggacctggtgtgggccggc agggttaccggggatacctttgcccccgtccgtgccatgatcgccggaggacggacggcc caccggcaagttgcgaaagccccgagggcccgtgcaccgcgcatgagccgtttgggtcgc cacggtgcaggcctccttggctcgccgggattgagcggcggacgctacggttcaaccgct gcgtcggcacccacgccgccgctcgccgtcgggcgttggtccgcgcttcccgccccggag ctcgaccccaccatccatgcccgcggtaccgcggaactcctgctggacaggtacggagtg gtgacgcgcgggtccgtgatggccgagaacatcctgggcgggtttgggttgatgtacaag gtcctggcccggttggaagaggcaggacggtgccgccggggctacttcattgagcacctt ggcgcggcccaattcgcggtgcctgccacagtggacaggctgcggtccttcacggaagac gcccggatctccaaggccgagccgttagcgttggccttggcggcaacggacccggcgaac ccttacggcgccgccctcccgtggccgggtgtggccggtgaagccggatcgggacaccgc ccgggcaggaaggccggagctttggtggtgatggtcgacggcgcgttagtgctttacgtc gaacgcggcggcaagaccctgctcaccttcagccacgacgaggctgccttgaccgtggcc gccgaggccttggtgggcgtagtgcgccgcggcgccgtggacaaactcttcatggaaaaa gtgaacggccacgatctcctggagacccccatagccgtggcattggctgccgccggcgcc tactccacaccgaagggactgcgtatccgtgcctga

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