KEGG   Paenarthrobacter sp. YJN-5: HMI59_17735
Entry
HMI59_17735       CDS       T10115                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
payj  Paenarthrobacter sp. YJN-5
Brite
Enzymes [BR:payj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HMI59_17735
    5.6.2.6  RNA 3'-5' helicase
     HMI59_17735
DNA repair and recombination proteins [BR:payj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HMI59_17735
SSDB
Other DBs
NCBI-ProteinID: QOT18254
UniProt: A0A7M2C5A9
LinkDB
Position
3823941..3828956
AA seq 1671 aa
MQEQQASTGAMSRFSQATREWFLGAFSEPTAAQDGAWNAISSGSHALVVAPTGSGKTLAA
FLWALDRLHAAPSDALPGFEEVPAPAKGRAKRPKTKTRVLYISPLKALGVDVERNLRAPL
IGITQTAKRLGLPAPLVTVGVRSGDTTAADRRSLLSNPPDILITTPESLFLMLTSRARET
LSEVDTVIIDEVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVQPRELVAQFLAG
QAPVEIVAPPSKKNWNLTVTVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEQIVD
LVLSKQSTIVFANSRRLSERLTARLNEIYAERQLMAEAGSPWAEPAAGNTEDWGAGDDAV
VASPVKAPVSTATPAHMMAQAGSTSGSDPVLARAHHGSVSKDQRAMIEDDLKSGRLRCVV
ATSSLELGIDMGAVDLVIQVESPPSVASGLQRVGRAGHQVGEISEGVLFPKHRADLLHTS
VTVERMLSGQIERLSIPTNPLDILAQQTVAATALGSIDVEEWFSTVRRSAPFASLPRSAF
EATLDLLAGRYPSDEFAELRPRIVWDRHAGTIEGRPGSQRLAVTSGGTIPDRGLFGVYII
GTEVEGTGSSGGSDSDGPSPSARAAKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDI
THDRVLVSPAFGQPGKLPFWKGDSLGRPVDLGRALGAFIRELSAADSGPAMERCQASGLD
TFAANNLIQYLEEQKQATEVVPSDRTLVVERFHDELGDWRVVLHSPFGMPVHAPWALAVG
QRLQQRYGLDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFAS
RFRECAARALLLPRQNPTKRQPLWQQRQRSAQLLDVAKKYPSFPIVLETVRECLQDVYDL
PALKDIAASVERRELRIVETTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDS
TLLNELLGRVELRELLDAAVIDSTERELQRLVPDRRVRGMEGIADLLRLLGPLDVKEVAE
RLQGQELVQEQEQLLNQEQFQDHAEDQELTEDKALPPGTPAEAEQHLLALQKTNRALKVT
IGGVERFAAIEDAARLRDAIGVPLPMGVPLAFIEPVQDPLGDLVSRYARTHGPFTAAEAA
TRLGLGVAVVNTALKRLAADGRVVEGEFRPHAVAATQDPETTDPELMGPEAPPASEWCDA
EVLRKLRRRSLAALRAEVEPVDAAAYGRFLPAWQNVSAQGKSRGSALRGLDGIITAVDQL
SGVPVPASAWEPLVLASRVADYKPAMLDELMAAGELLWSGAGQLPGNDGWISLHVADSAE
LTLNPSPDFEPGDAQQRLLDYLSAGGGYFFRQLTDVAGGMDAVLSDDAVVSALWDLVWAG
RVTGDTFAPVRAMIAGGRTAHRQVAKAPRARAPRMSRLGRHGAGLLGSPGLSGGRYGSTA
ASAPTPPLAVGRWSALPAPELDPTIHARGTAELLLDRYGVVTRGSVMAENILGGFGLMYK
VLARLEEAGRCRRGYFIEHLGAAQFAVPATVDRLRSFTEDARISKAEPLALALAATDPAN
PYGAALPWPGVAGEAGSGHRPGRKAGALVVMVDGALVLYVERGGKTLLTFSHDEAALTVA
AEALVGVVRRGAVDKLFMEKVNGHDLLETPIAVALAAAGAYSTPKGLRIRA
NT seq 5016 nt   +upstreamnt  +downstreamnt
atgcaggagcagcaggcgtccacaggcgccatgagccgtttcagccaggcaaccagggaa
tggttcctcggcgctttcagtgagcccacggccgcccaggatggcgcgtggaatgccatt
tcctccggctcccatgccttggtggtagcccccaccggttcgggaaagaccttggccgcg
ttcctctgggcgttggacaggctgcacgctgccccgtcggatgctttgccgggatttgag
gaggttccggcgccggccaagggccgcgccaagcgtcccaagaccaagacccgcgtcctc
tatatatcgccgctcaaggctctcggcgtggacgtggaacgcaacctccgcgccccgctg
atcggcatcacgcaaacggcaaagcgtttgggcctgcccgcaccgctggtgacggttggc
gtccgttcgggagatacgacggcggcagaccgccggtcgctgctgtccaaccctccggac
atcctcattacaacgccggaatccctgttcctgatgctgacgtcgcgtgcacgggagacg
ctcagcgaagtggacaccgtgatcatcgacgaagtccacgctgttgccggcaccaagcgc
ggtgcccatctcgctgtatcgctggaacgcctggacgcgctattgcccaagcccgctcaa
cgcatcgggttgtccgccaccgtgcagccgcgcgagctggtggcccaattccttgccggt
caggctccggtggagatcgttgctcccccttccaagaaaaactggaacctgacggtcacc
gtgcctgttgaggacatgtcggacctccagggtgctgccggcgcgttcgattccgggccg
gcttccggattgcagccgcaagcttccatctggccgcacgttgaggagcagattgtggat
ctggtcctctccaagcagtccaccattgtctttgccaattcacgtcgcctttcggagcgg
ctgaccgcccggttgaacgagatctacgcggaacggcaacttatggcggaggcgggttca
ccgtgggctgagccggctgccgggaatacggaggactggggcgccggagatgacgccgtg
gttgcgtctcccgtcaaggcaccggtttccaccgcaacccccgcgcacatgatggcccag
gcgggcagcaccagcggaagcgatcccgttctggccagggcccaccatggttcagtgtcc
aaggaccaacgggccatgatcgaggacgacctcaaatccggcaggctgcgctgtgttgtt
gcaacgtcttccctggaactgggcatcgacatgggcgcggtggaccttgtcatccaggta
gagtccccgccctcggttgccagcggccttcagcgcgtcgggcgtgccgggcaccaagta
ggcgaaatctccgagggcgtactcttccccaagcaccgggccgacctcctccacacgagc
gtcacggtggagcggatgctcagtggacagatagagcggctgagcatccccaccaacccg
ctggacatccttgcccagcagaccgtcgcggccaccgcgttggggagcatcgacgtcgag
gaatggttcagcaccgttcgccgctcggcgccgttcgccagcctcccccggtcagcgttc
gaggccaccctggacctcctggcaggccggtacccctccgatgagtttgccgagctgcgg
ccccgcatcgtgtgggaccgccatgcgggaaccattgagggccggcccggatcccagcgg
ctggcagtcacgtccggtggcaccattcccgaccgcggcctcttcggggtgtacatcatc
ggcacggaagttgaagggaccggttcatccggtggctctgacagcgacggcccgagccca
tcggcccgtgcagccaagggcggccgccgcgtgggcgagctcgacgaggaaatggtctac
gaatcccgggtcggggacgtctttgccctcggagcaacaagctggaaaatcgaggacatc
acgcacgaccgtgtcctcgtctcccccgccttcggccagccgggcaaattgccgttctgg
aagggtgactccctgggccgcccagtggaccttggacgtgcactgggcgcgttcatccgg
gaactttcggcagctgactccggcccggccatggaacgctgccaggccagcggcctggac
acctttgcggcaaataacctgattcagtacctcgaggaacagaagcaggccaccgaggtt
gtgcccagcgaccgaacgctggtggtggaacgcttccacgatgaactgggtgactggagg
gtggtccttcacagccccttcggcatgccggtccacgcgccgtgggcccttgctgtgggt
cagagactccagcagcgttacggcttggacggatcggcaatggctgccgatgacggcatt
gtgctcagggtacccatgatggaagacgaacctcccggcgcggagctgttcctcttcgat
ccggaggaactggaacaaattgtcaccgcagaggttggcggcagcgctctcttcgcgtcg
cgtttccgggaatgcgctgcccgggccttgctgctgccgcgtcaaaaccccaccaaacgg
caaccgctgtggcagcaacgccagcgttccgcccagctgctggacgtcgccaagaagtac
ccgtcgttccccatcgtgctggaaaccgtgcgcgaatgcttgcaggacgtctacgatctc
ccggcgctcaaggacatcgcagcctccgtggaacgcagggaattgcggatcgtcgaaacc
actacgcagcagccatctcctttcgccaaatcactgttgttcggctatgtcgcccagttc
ctctatgagggcgactcccccctggccgagcgcagggctgcggcactggccctcgactcc
accctcctgaacgagctcctaggcagggtggaactccgtgagctcctggacgcggcagtc
atcgattccaccgagcgggagctgcaacggctggttccggatcgtcgggttcgtgggatg
gaaggcattgcggacctcctccggctcctgggtccgctcgacgtgaaggaagtagccgag
cgtctgcaagggcaggaactggttcaggagcaggaacagctgctgaaccaggaacagttt
caggaccacgcggaggaccaggaactcaccgaagacaaggctcttcctcccggaactccc
gccgaagcagagcagcaccttttggcattgcagaagaccaaccgcgccctcaaggtgact
atcggcggcgtcgaacgctttgctgccattgaagatgcggcgcggcttcgcgatgcaatc
ggcgttcccctccccatgggtgtgccgctggcctttatcgaacccgtgcaggacccgctg
ggagacctcgtttcccgttacgcccgcacgcatggaccattcactgcggccgaagcggcg
acgcggctgggactgggcgtcgccgtcgtcaatactgccctgaagcggctggctgcagac
ggcagggttgtggagggtgagttccgaccccacgccgtcgccgcaacccaggaccctgaa
accaccgatcccgagttgatgggcccggaagctcctcctgccagcgaatggtgtgacgcc
gaggtcttgcggaaattgcggcgccgctccctcgctgcgttgcgggcggaagtggaaccg
gtggacgccgccgcttacggtcgcttccttcccgcatggcaaaacgtcagtgcccaagga
aagtcgaggggctcggccctgcggggtctggatggcatcatcactgccgtggaccagctg
tccggggttcccgtcccggcatcggcttgggaaccgctggtgctggccagcagggtggcc
gactacaaacctgcgatgctcgatgaactcatggcagcgggggaactgctctggtccgga
gccggtcagttgcccggcaatgacggatggatcagccttcatgttgcggactccgccgag
ctgaccctgaatccctcgccggacttcgaacccggcgatgcccagcaacgcctgctggac
tatctgagtgccggcggtggctacttcttccgacaactaacggacgttgccgggggtatg
gacgccgtgctcagtgacgacgccgtcgtctcagcgctgtgggacctggtgtgggccggc
agggttaccggggatacctttgcccccgtccgtgccatgatcgccggaggacggacggcc
caccggcaagttgcgaaagccccgagggcccgtgcaccgcgcatgagccgtttgggtcgc
cacggtgcaggcctccttggctcgccgggattgagcggcggacgctacggttcaaccgct
gcgtcggcacccacgccgccgctcgccgtcgggcgttggtccgcgcttcccgccccggag
ctcgaccccaccatccatgcccgcggtaccgcggaactcctgctggacaggtacggagtg
gtgacgcgcgggtccgtgatggccgagaacatcctgggcgggtttgggttgatgtacaag
gtcctggcccggttggaagaggcaggacggtgccgccggggctacttcattgagcacctt
ggcgcggcccaattcgcggtgcctgccacagtggacaggctgcggtccttcacggaagac
gcccggatctccaaggccgagccgttagcgttggccttggcggcaacggacccggcgaac
ccttacggcgccgccctcccgtggccgggtgtggccggtgaagccggatcgggacaccgc
ccgggcaggaaggccggagctttggtggtgatggtcgacggcgcgttagtgctttacgtc
gaacgcggcggcaagaccctgctcaccttcagccacgacgaggctgccttgaccgtggcc
gccgaggccttggtgggcgtagtgcgccgcggcgccgtggacaaactcttcatggaaaaa
gtgaacggccacgatctcctggagacccccatagccgtggcattggctgccgccggcgcc
tactccacaccgaagggactgcgtatccgtgcctga

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