KEGG   Paenarthrobacter sp. YJN-5: HMI59_19000
Entry
HMI59_19000       CDS       T10115                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
payj  Paenarthrobacter sp. YJN-5
Pathway
payj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:payj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HMI59_19000 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:payj03400]
    HMI59_19000 (xth)
Enzymes [BR:payj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     HMI59_19000 (xth)
DNA repair and recombination proteins [BR:payj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     HMI59_19000 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_3
Other DBs
NCBI-ProteinID: QOT18481
LinkDB
Position
4106359..4107165
AA seq 268 aa
MKIATWNVNSLRARADRVEAWLERSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGVN
QWNGVAIASRVGLEDVERTFVDQPAFGKAGKDPAQEARAIAATCAGMRIWSLYVPNGRSL
DDEHMPYKIKWLEVLRGQAAEWVQADPNAQIALMGDWNIAPFDEDVWDIQLFRDNNFTHV
SEPERAAFHAFETAGFTDVVRPYTPGPGVYTYWDYTQLRFPKKEGMRIDFCLASAPLAAR
VTGASIDREERKGKGASDHAPVIVELAD
NT seq 807 nt   +upstreamnt  +downstreamnt
gtgaagatagctacctggaacgtgaactccctccgcgcccgcgccgaccgcgttgaagcc
tggcttgagcgcagcgactgcgatgtcctggccatccaggaaaccaaatgcaaggatgac
aacttcccgtgggagctgttcgaacgcatgggctacgaggtggcgcacttcggcgttaac
cagtggaacggcgtcgccatcgcctcgcgcgtcggcctggaagacgtcgagcggaccttc
gtggaccagccggctttcggcaaggccggcaaggatccggcccaggaagcccgtgccatc
gcagctacctgtgccggcatgcgtatctggagcctgtacgtccccaacggccgctccctg
gacgacgaacacatgccttacaagatcaagtggctcgaggtcctccgcggacaggccgct
gaatgggtccaggctgatccgaacgcccagatcgccctcatgggcgactggaacatcgcg
cccttcgacgaggacgtgtgggacatccaactcttccgcgacaacaacttcacccacgtc
agcgaaccggagcgggcagcgttccacgccttcgagaccgcaggcttcaccgacgtcgtc
cgcccctacacccccggcccgggcgtctacacctactgggactacacccagctgcgcttc
cccaagaaggaaggcatgcggatcgacttctgcctcgcctcggcgccgttggccgcccgc
gtcacaggcgcctccattgatcgtgaagagcgcaagggcaagggcgcctcggaccacgca
cccgtgatcgtggaactcgcagactag

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