Paenarthrobacter sp. YJN-5: HMI59_19470
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Entry
HMI59_19470 CDS
T10115
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
payj Paenarthrobacter sp. YJN-5
Pathway
payj02010
ABC transporters
payj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMI59_19470
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HMI59_19470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
payj02000
]
HMI59_19470
Transporters [BR:
payj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HMI59_19470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
QOT18559
LinkDB
All DBs
Position
4200028..4201182
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AA seq
384 aa
AA seq
DB search
MRRSATAGALALATIAALFTGCASDTGAAPAGSQNPLAQVKAEELVPKDIVGRGPNGVKS
GTLDDIKLTEAEVNQAKQRKFRVGIVMQTMNIEWSTEQVRAITDRLKKYDAEVVGVADPN
FDVQKQVSSIENMIQLKPDAIISIPVDDTATAEAYRKIGAAGIKLIMMDNVPTGLKYPKD
YQGMVSSDNQGNGAVCAEALAKHIPQGGTVGVLDFGVDFFVTKERMKGFVGWMKANRPDI
KIKVAEFLDPANSGKDAGNFLTANPDVQGMFTEWEVPAVGIDQALRAQGKTMPITAVNIA
SDVAADLATGGNIKALGAQVPYDQGLAEADMAIKVLLGGTAPNWLAFPAVPVLQNNVLQA
WKQVYHQDPPSQLAEACKSTEGCG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtcagcaacagccggggcccttgccctcgccacgatcgctgcattatttact
ggctgcgcctcggacacgggggcagcgcccgctggcagccagaacccactcgcacaggtc
aaggcagaagagctcgtgcccaaggacatcgtcggacgcgggccgaacggagtaaagtcc
gggacccttgacgacatcaaactgaccgaggcggaagtcaatcaggccaagcagcggaaa
ttccgggtcggcatcgtcatgcagacgatgaacatcgagtggtccaccgaacaggttcgg
gccattaccgaccggttgaagaagtacgacgccgaggtcgttggcgtggccgatcccaac
tttgacgtccaaaagcaggtatcaagcatcgagaacatgatccagctgaaaccggacgcg
atcatcagcatcccggtggacgacacagccacggccgaggcctatcgcaagattggtgct
gccggcatcaagctcatcatgatggacaacgtgcccacgggactgaagtacccgaaggac
taccagggcatggtttcatccgacaaccagggcaacggcgccgtctgcgccgaggcactg
gccaagcacatcccgcaaggcggaaccgttggcgtgctcgacttcggagtcgacttcttt
gtgaccaaggaacgcatgaagggcttcgtcggctggatgaaggccaaccgccccgacatc
aagatcaaagtcgccgaattcctcgatccagctaactcaggcaaggacgccgggaatttc
ctcacggcgaacccggacgtccagggaatgttcactgaatgggaagtcccggcagtgggc
attgaccaggccctgcgggcccagggcaaaacgatgccaatcaccgcagtcaacatcgcc
tccgatgtggcggccgacctcgctaccggcggcaacatcaaggccttgggggcccaggtt
ccctacgaccagggcctggccgaggctgacatggccatcaaggtgctactgggcggcacc
gctcccaattggcttgctttccccgcagtgccggttctccagaacaacgtcctccaggcg
tggaagcaggtctaccaccaggacccacccagccagctcgcagaggcgtgcaagtccacc
gagggctgcgggtaa
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