Paenarthrobacter sp. YJN-5: HMI59_21040
Help
Entry
HMI59_21040 CDS
T10115
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
payj Paenarthrobacter sp. YJN-5
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
payj03032
]
HMI59_21040 (gyrB)
03400 DNA repair and recombination proteins [BR:
payj03400
]
HMI59_21040 (gyrB)
Enzymes [BR:
payj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMI59_21040 (gyrB)
DNA replication proteins [BR:
payj03032
]
Prokaryotic type
DNA Topoisomerases
HMI59_21040 (gyrB)
DNA repair and recombination proteins [BR:
payj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMI59_21040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
RrnaAD
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QOT18830
UniProt:
A0A7M2C9P8
LinkDB
All DBs
Position
complement(4519744..4521819)
Genome browser
AA seq
691 aa
AA seq
DB search
MANDNAETLAVEPAEEAAPTQSEAQTPREYGASDITVLEGLEAVRKRPGMYIGSTGPRGL
HHLVYEVVDNSVDEALAGYCSHIEVTLQADGGVKVVDDGRGIPVDIHPSEGKPTVEVVMT
ILHAGGKFGGGGYAVSGGLHGVGISVVNALSRRVETEVRRQGHVWRMSFADGGKPQGELV
KGEATEETGTSQTFYPDGTIFESTEFDFETLRARFQQMAFLNKGLKITLTDERPAARAGD
DELDLDAVATEGEVAAEHRTVVYEYPDGLLDYVKHLNSNKKVEIVHEDVIAFETEDTERH
ISVEVAMQWTTAYSESVHTYANTINTHEGGTHEEGFRAAMTSLINRYAREKNIIKEKEDN
LTGDDIREGLTAVISVKLSEPQFEGQTKTKLGNSEVKGFVQRVVTDQLGDWLERNPGPAR
DVIRKAIQAAQARMAARKARDNARRKSPLESFGMPGKLSDCSSKDPSRCEVYLVEGDSAG
GSAKRGRNPETQAILPLRGKILNVERARLDKALGNAEVQSMITAFGTGIGEDFDISKLRY
HKIVLMADADVDGQHITTLLMTLLFRYMRPLIENGYVYLAQPPLYRIKWSNAAHDYVFSD
RERDETIRKGAAMNKRLPKENGIQRYKGLGEMDYTELWDTTMDPDRRTLLQVTMDDALAA
DQTFSVLMGEDVESRRNFIQQNAKDVRFLDI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtggctaacgacaatgcagagaccttggcagtagagcccgcagaggaggctgctcccacg
cagagtgaggcgcaaacgccaagggaatacggtgccagcgacatcaccgtgctggagggc
ctcgaagccgtacgcaaacgccccggcatgtacatcggttccaccggtccgcgcggtttg
caccacttggtttatgaagtggtggacaactctgtagatgaagctttggccggctactgc
agccacatcgaggtgacgctgcaggctgacggcggagtgaaagtggttgacgacggccgc
ggtatccccgttgacatccacccctccgaaggcaagcccacggttgaagtggtcatgacc
atcctgcacgccggaggcaagttcggcggcggcggttacgccgtttccggcggccttcac
ggcgtgggtatttccgtcgtcaatgcgctgtcccgtcgtgtcgagaccgaagtccggagg
cagggccacgtctggcgcatgtctttcgccgacggcggcaagccgcagggcgaactcgtc
aagggcgaggccacggaagagacagggacatcccagacgttctacccggacggcaccatc
tttgaaagcacggagttcgacttcgagaccctgcgtgcccgcttccagcaaatggcgttc
ctcaacaagggcctgaaaatcaccctgacggatgagcgcccggctgctcgggccggtgac
gacgagctcgacctcgacgccgttgccaccgaaggtgaagtagcagccgaacaccgcact
gttgtctatgaatacccggacggcttgctggactacgtcaagcacctgaactccaacaag
aaggtggaaatcgtccacgaggacgtcatcgccttcgaaaccgaggacaccgaacggcac
atctcggtggaagtcgccatgcagtggaccaccgcgtattccgagagcgtccacacgtac
gcgaacaccatcaacacccatgagggcggtacgcacgaagagggcttccgcgctgcgatg
acgtcgctcatcaaccgctacgcacgcgagaaaaacatcatcaaggagaaggaagacaac
ctgacgggtgatgatatccgtgagggcctgaccgccgtcatctcggtgaagctttccgag
ccccagttcgaaggccagaccaagaccaaactgggcaactccgaggtcaagggcttcgtc
cagcgcgttgtgaccgatcagctcggtgactggttggagcgcaaccccggtcctgcccgc
gatgtcatccggaaagccatccaggctgcgcaggcacgcatggccgcgcgtaaagcccgc
gacaatgcgcggcggaagagcccgcttgagtccttcggcatgcccggcaagctctctgat
tgctcgtcgaaggatccttcacgttgcgaggtctatctggtggagggtgactccgcaggc
ggttcggccaagcgcggccgcaacccggagacacaggccatccttccgttgcgaggcaag
atcctcaacgttgagcgagcacgcttggacaaagccctgggcaacgccgaagtgcagtcc
atgattacggcgttcggtacgggcattggcgaggacttcgatatttcgaagctccggtac
cacaagatcgtcctcatggcagatgccgacgttgacggccagcacatcaccacgctcttg
atgacgctgctgttccgctacatgcgtcccctcatcgaaaacggttacgtctatttggcc
cagccgccgctgtaccggatcaagtggtccaacgccgcgcatgactacgtgttcagtgat
cgcgaacgggatgaaaccatccgcaagggtgctgcgatgaacaagcggctccccaaggag
aacggcatccagcgctacaagggccttggcgagatggactacacggaactgtgggatacc
accatggatcccgatcgccggaccctcctccaagtcaccatggatgacgcacttgcagcc
gatcagaccttctccgtccttatgggcgaggacgttgaatcacgcaggaactttatccag
cagaacgccaaggacgtcaggttcctggatatttag
DBGET
integrated database retrieval system
