Paenarthrobacter sp. YJN-5: HMI59_21300
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Entry
HMI59_21300 CDS
T10115
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
payj Paenarthrobacter sp. YJN-5
Pathway
payj03030
DNA replication
payj03430
Mismatch repair
payj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
payj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMI59_21300
03430 Mismatch repair
HMI59_21300
03440 Homologous recombination
HMI59_21300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
payj03032
]
HMI59_21300
03400 DNA repair and recombination proteins [BR:
payj03400
]
HMI59_21300
Enzymes [BR:
payj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMI59_21300
DNA replication proteins [BR:
payj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMI59_21300
DNA repair and recombination proteins [BR:
payj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMI59_21300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
HipA_C
Motif
Other DBs
NCBI-ProteinID:
QOT19250
LinkDB
All DBs
Position
pYJN5-1:52198..52761
Genome browser
AA seq
187 aa
AA seq
DB search
METIPGLDFTAIDFEAANSDRASACAVGVAVVRDGIITHTRSWLIRPHTGIDSFDRYATR
VHGIDAAMVAGAPSLEDSMHTLAGLIGDGPVLAHNIGYDGAVLRTSFEIAGLPRPANEFR
CTETLARAAFRLPKNKLADVAAHLGLPAFAAHNAGDDARTCARIALALAARHNATSITGL
YRSLGIQ
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgatccccggcctggacttcacggccatcgacttcgaagccgccaactccgac
cgagcctccgcctgcgccgtgggtgtggcggtggtccgcgacggcatcatcactcacacc
cggtcctggctgatccgtccgcacaccggcatcgactcgttcgatcgttacgccacccgg
gtacacggcatcgacgccgccatggtggccggggcgccctctctcgaagactccatgcac
accctggccggactcatcggtgacgggcccgtgctcgcgcacaacatcgggtacgacggc
gccgtgctgcggacgtccttcgagatcgcagggctgccgaggccggccaacgagttccgg
tgcaccgagaccctggcacgagccgcgttccggctgcccaagaacaaactcgccgacgtg
gcagcgcaccttggcctgcccgcattcgcagcccacaacgccggggatgacgcgcgcacc
tgcgcccgcatcgcgctggccctggctgcccgccacaacgccacctccataaccggcctc
taccgcagcctcggcatccagtga
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