Paenarthrobacter sp. YJN-D: HMI60_02740
Help
Entry
HMI60_02740 CDS
T10599
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn03030
DNA replication
payn03410
Base excision repair
payn03420
Nucleotide excision repair
payn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMI60_02740 (polA)
03410 Base excision repair
HMI60_02740 (polA)
03420 Nucleotide excision repair
HMI60_02740 (polA)
03440 Homologous recombination
HMI60_02740 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
payn03032
]
HMI60_02740 (polA)
03400 DNA repair and recombination proteins [BR:
payn03400
]
HMI60_02740 (polA)
Enzymes [BR:
payn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMI60_02740 (polA)
DNA replication proteins [BR:
payn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HMI60_02740 (polA)
DNA repair and recombination proteins [BR:
payn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HMI60_02740 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMI60_02740 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
QOT20530
LinkDB
All DBs
Position
577774..580578
Genome browser
AA seq
934 aa
AA seq
DB search
MPTRLAPVSETTKPDQVPTAQAAAIATAPAPSATTSSVSAGEGRPRLLVLDGHSMAFRAF
YALPAENFSTARGQYTNAVHGFTSMLINLIKDQKPTHVAVAFDVSDDTTFRKAEYSEYKG
GRNATPAEFAGQIGLIARVMEAWGIKTIAMPGYEADDVLATLASQADAAGFEVLLVSGDR
DAFQLINDNVFVLYPKQGVSNIPKMDAAAIEEKYFVKPGLYSDLAALVGESADNLPGVPG
VGPKTAAKWINLYGGLEGILENLDSIGGKVGGALKENLENVKRNRRLNQLLTDLELPITL
EDLHEPRPDRQAIEELFEELEFRTLRTRLFDLYGDDTAGAAPDTIDAPEFDSLTDASGLE
AFFTAGSGMRSALAVQMVPGRVGEDASALAVVRANGAAFIELTGLDAEAEGVLARWLRDP
EEAKVLHEFKAALKALHNRGLGLEGVVDDTSISGYLIQPDRRSYDLAELAQVHLKISLAT
AASQSGQLELDLSGDTDQAAAAALVQHAAVVHALSKHFEKELADRKADALLTTLELPVAR
VLAQMELTGIFVSTDRMDEQLADLTKVIQTAQEQAFAAIGHEVNLGSPKQLQTVLFEELG
LPKTKKIKSGYTTDAASLKALLEKTGHEFLVQLMAHRESSKLAQMVETLKKSVADDGRIH
TTYAQNIAATGRISSNNPNLQNIPVRSEEGRRVRGIFVVGEGYECLLSADYSQIEMRIMA
HLSGDEALIQAYRDGEDLHRFVGSRIFNVAPAEVTSAMRSKVKAMSYGLAYGLTSFGLSK
QLEISVDEARTLMKDYFDRFGGVRDYLRGVVDQARTDGYTATIEGRRRYLPDLTSTNRQA
REAAERIALNSPIQGSAADLIKRAMLGVSAELASQGLKSRMLLQVHDELVLEVAPGEREA
VEKLVIEQMGSAADLSVPLDVQIGVGSSWYEAGH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgccaactaggctggcacctgtgagtgaaacaaccaaaccggaccaggttccaacggcc
caagctgctgccattgcaacagcacccgccccttctgccactacttccagcgtctccgcg
ggggagggccggccaaggttgctggtcctggatggccactccatggcgtttagggctttc
tacgcccttcctgccgagaatttctccacggcccggggtcagtacaccaacgcggtgcac
ggttttacgtccatgctgatcaacttgatcaaggaccagaagcccacgcatgtggctgtc
gctttcgacgtttccgacgacacgacgttccgcaaggcggagtacagcgagtacaagggc
ggccgaaacgccactccggctgagttcgccggccagataggcctcattgcgcgggtgatg
gaggcatggggcatcaaaaccatcgccatgcccggatacgaggctgacgatgtccttgcg
acgctggcctcgcaggctgatgctgccggtttcgaggtgctgctggtttccggtgaccgg
gacgccttccagctcatcaacgacaacgtttttgtgctttatccgaagcagggtgtcagc
aacattcccaagatggacgcggccgccatcgaggagaagtacttcgttaagcccggtttg
tactccgacctcgccgcacttgtcggcgaatccgccgacaacctgcccggcgttccaggc
gttggccccaagactgcggccaagtggatcaacctctatggcggcctggaaggcatcctg
gagaaccttgactccattggaggcaaggtgggcggcgcgctcaaggagaacctggaaaac
gtcaagcgcaaccgcaggctgaaccagttgctcacggacctggagctgcccatcacattg
gaggatctccacgaaccgcgtcctgaccggcaggccatcgaagagctttttgaagagctc
gaattccggaccctccgcacgcgccttttcgacctctatggtgacgacacagcgggggct
gctccggacaccatcgatgcccccgagttcgactcactcacggatgcttccgggctggaa
gcctttttcaccgccggatccggcatgcgttcggccctggccgtgcagatggtccccggc
cgggtgggtgaggacgccagtgccttggccgtcgtccgcgccaacggtgcagccttcatt
gaactgacgggcctggacgccgaggccgagggagtgttggcccgctggctgcgcgacccc
gaagaagccaaagtgctgcacgagttcaaggcggcacttaaggccctacacaaccgtggc
ctcggcctggaaggggtcgtggatgacacgtccatctccgggtacctcatccagcccgac
cgccgcagctacgacctcgccgaactcgcacaggtccatctcaaaatctccctggccacg
gccgcttcccagtccggacagctggaactcgacctctccggtgatacggaccaggctgcc
gctgccgcgctcgtccagcatgccgccgtcgtgcacgcgctcagcaagcacttcgaaaag
gagcttgcagaccgcaaagccgacgccctgctgaccacgctggaacttccagtggcgcgc
gtcctggcccaaatggaactgacgggcatcttcgtctccacggaccgcatggatgaacag
ctggcggacctcaccaaggtgatccagaccgcccaggaacaggcgtttgcggctatcggg
catgaggtgaacctcggttcgcccaagcagctgcagacagtcctgttcgaggaactgggc
ctgcccaagaccaagaagatcaagtccggctacaccacggacgctgcctcgctcaaggct
ctgcttgaaaagaccggccacgagttcctggtccagctcatggcgcaccgagagtcgtcc
aagctggcacagatggtggagacgctgaagaagtccgtcgctgacgatgggcgaatccac
accacctacgcgcagaacatcgccgccaccggccgtatctcgtccaacaacccgaatctg
cagaacatcccggtccgcagcgaagaggggcgccgggtccgcggtattttcgtggtgggc
gaaggttacgagtgcttgttgtccgctgactattcgcagatcgaaatgcggatcatggcc
cacctttcgggcgatgaggcattgatccaggcgtaccgggacggcgaagaccttcaccgc
tttgtgggctcgcggatcttcaacgtcgcgccggcagaagtcaccagcgccatgcgctcc
aaggtcaaggcaatgtcgtacgggctggcctacggcctcacctccttcggcctgtccaag
caattggagatttccgtcgatgaggcccggacgctcatgaaggactactttgaccgcttc
ggtggtgtccgggactacctgaggggcgtcgtggaccaggccaggaccgacggctacacc
gccaccatcgaaggccgccgccgctacctgccggatctgaccagcaccaaccgccaggcc
agggaagcagcagagcggatcgccttgaactcgccgatccagggctccgctgccgacctc
atcaagcgggccatgctgggggtatcggccgagctcgccagccagggcctgaagtcccgc
atgctgctgcaggtccacgacgaactcgtcctggaagtagcgccgggggagcgcgaagcc
gtggagaaactggtcatcgaacaaatgggctctgccgcggacctgtcagttccgctcgat
gtccagatcggcgtcggatcaagctggtacgaggccggacactag
DBGET
integrated database retrieval system