KEGG   Paenarthrobacter sp. YJN-D: HMI60_02740
Entry
HMI60_02740       CDS       T10599                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
payn  Paenarthrobacter sp. YJN-D
Pathway
payn03030  DNA replication
payn03410  Base excision repair
payn03420  Nucleotide excision repair
payn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:payn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HMI60_02740 (polA)
   03410 Base excision repair
    HMI60_02740 (polA)
   03420 Nucleotide excision repair
    HMI60_02740 (polA)
   03440 Homologous recombination
    HMI60_02740 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:payn03032]
    HMI60_02740 (polA)
   03400 DNA repair and recombination proteins [BR:payn03400]
    HMI60_02740 (polA)
Enzymes [BR:payn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HMI60_02740 (polA)
DNA replication proteins [BR:payn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HMI60_02740 (polA)
DNA repair and recombination proteins [BR:payn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HMI60_02740 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HMI60_02740 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: QOT20530
LinkDB
Position
577774..580578
AA seq 934 aa
MPTRLAPVSETTKPDQVPTAQAAAIATAPAPSATTSSVSAGEGRPRLLVLDGHSMAFRAF
YALPAENFSTARGQYTNAVHGFTSMLINLIKDQKPTHVAVAFDVSDDTTFRKAEYSEYKG
GRNATPAEFAGQIGLIARVMEAWGIKTIAMPGYEADDVLATLASQADAAGFEVLLVSGDR
DAFQLINDNVFVLYPKQGVSNIPKMDAAAIEEKYFVKPGLYSDLAALVGESADNLPGVPG
VGPKTAAKWINLYGGLEGILENLDSIGGKVGGALKENLENVKRNRRLNQLLTDLELPITL
EDLHEPRPDRQAIEELFEELEFRTLRTRLFDLYGDDTAGAAPDTIDAPEFDSLTDASGLE
AFFTAGSGMRSALAVQMVPGRVGEDASALAVVRANGAAFIELTGLDAEAEGVLARWLRDP
EEAKVLHEFKAALKALHNRGLGLEGVVDDTSISGYLIQPDRRSYDLAELAQVHLKISLAT
AASQSGQLELDLSGDTDQAAAAALVQHAAVVHALSKHFEKELADRKADALLTTLELPVAR
VLAQMELTGIFVSTDRMDEQLADLTKVIQTAQEQAFAAIGHEVNLGSPKQLQTVLFEELG
LPKTKKIKSGYTTDAASLKALLEKTGHEFLVQLMAHRESSKLAQMVETLKKSVADDGRIH
TTYAQNIAATGRISSNNPNLQNIPVRSEEGRRVRGIFVVGEGYECLLSADYSQIEMRIMA
HLSGDEALIQAYRDGEDLHRFVGSRIFNVAPAEVTSAMRSKVKAMSYGLAYGLTSFGLSK
QLEISVDEARTLMKDYFDRFGGVRDYLRGVVDQARTDGYTATIEGRRRYLPDLTSTNRQA
REAAERIALNSPIQGSAADLIKRAMLGVSAELASQGLKSRMLLQVHDELVLEVAPGEREA
VEKLVIEQMGSAADLSVPLDVQIGVGSSWYEAGH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgccaactaggctggcacctgtgagtgaaacaaccaaaccggaccaggttccaacggcc
caagctgctgccattgcaacagcacccgccccttctgccactacttccagcgtctccgcg
ggggagggccggccaaggttgctggtcctggatggccactccatggcgtttagggctttc
tacgcccttcctgccgagaatttctccacggcccggggtcagtacaccaacgcggtgcac
ggttttacgtccatgctgatcaacttgatcaaggaccagaagcccacgcatgtggctgtc
gctttcgacgtttccgacgacacgacgttccgcaaggcggagtacagcgagtacaagggc
ggccgaaacgccactccggctgagttcgccggccagataggcctcattgcgcgggtgatg
gaggcatggggcatcaaaaccatcgccatgcccggatacgaggctgacgatgtccttgcg
acgctggcctcgcaggctgatgctgccggtttcgaggtgctgctggtttccggtgaccgg
gacgccttccagctcatcaacgacaacgtttttgtgctttatccgaagcagggtgtcagc
aacattcccaagatggacgcggccgccatcgaggagaagtacttcgttaagcccggtttg
tactccgacctcgccgcacttgtcggcgaatccgccgacaacctgcccggcgttccaggc
gttggccccaagactgcggccaagtggatcaacctctatggcggcctggaaggcatcctg
gagaaccttgactccattggaggcaaggtgggcggcgcgctcaaggagaacctggaaaac
gtcaagcgcaaccgcaggctgaaccagttgctcacggacctggagctgcccatcacattg
gaggatctccacgaaccgcgtcctgaccggcaggccatcgaagagctttttgaagagctc
gaattccggaccctccgcacgcgccttttcgacctctatggtgacgacacagcgggggct
gctccggacaccatcgatgcccccgagttcgactcactcacggatgcttccgggctggaa
gcctttttcaccgccggatccggcatgcgttcggccctggccgtgcagatggtccccggc
cgggtgggtgaggacgccagtgccttggccgtcgtccgcgccaacggtgcagccttcatt
gaactgacgggcctggacgccgaggccgagggagtgttggcccgctggctgcgcgacccc
gaagaagccaaagtgctgcacgagttcaaggcggcacttaaggccctacacaaccgtggc
ctcggcctggaaggggtcgtggatgacacgtccatctccgggtacctcatccagcccgac
cgccgcagctacgacctcgccgaactcgcacaggtccatctcaaaatctccctggccacg
gccgcttcccagtccggacagctggaactcgacctctccggtgatacggaccaggctgcc
gctgccgcgctcgtccagcatgccgccgtcgtgcacgcgctcagcaagcacttcgaaaag
gagcttgcagaccgcaaagccgacgccctgctgaccacgctggaacttccagtggcgcgc
gtcctggcccaaatggaactgacgggcatcttcgtctccacggaccgcatggatgaacag
ctggcggacctcaccaaggtgatccagaccgcccaggaacaggcgtttgcggctatcggg
catgaggtgaacctcggttcgcccaagcagctgcagacagtcctgttcgaggaactgggc
ctgcccaagaccaagaagatcaagtccggctacaccacggacgctgcctcgctcaaggct
ctgcttgaaaagaccggccacgagttcctggtccagctcatggcgcaccgagagtcgtcc
aagctggcacagatggtggagacgctgaagaagtccgtcgctgacgatgggcgaatccac
accacctacgcgcagaacatcgccgccaccggccgtatctcgtccaacaacccgaatctg
cagaacatcccggtccgcagcgaagaggggcgccgggtccgcggtattttcgtggtgggc
gaaggttacgagtgcttgttgtccgctgactattcgcagatcgaaatgcggatcatggcc
cacctttcgggcgatgaggcattgatccaggcgtaccgggacggcgaagaccttcaccgc
tttgtgggctcgcggatcttcaacgtcgcgccggcagaagtcaccagcgccatgcgctcc
aaggtcaaggcaatgtcgtacgggctggcctacggcctcacctccttcggcctgtccaag
caattggagatttccgtcgatgaggcccggacgctcatgaaggactactttgaccgcttc
ggtggtgtccgggactacctgaggggcgtcgtggaccaggccaggaccgacggctacacc
gccaccatcgaaggccgccgccgctacctgccggatctgaccagcaccaaccgccaggcc
agggaagcagcagagcggatcgccttgaactcgccgatccagggctccgctgccgacctc
atcaagcgggccatgctgggggtatcggccgagctcgccagccagggcctgaagtcccgc
atgctgctgcaggtccacgacgaactcgtcctggaagtagcgccgggggagcgcgaagcc
gtggagaaactggtcatcgaacaaatgggctctgccgcggacctgtcagttccgctcgat
gtccagatcggcgtcggatcaagctggtacgaggccggacactag

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