Paenarthrobacter sp. YJN-D: HMI60_03990
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Entry
HMI60_03990 CDS
T10599
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn00750
Vitamin B6 metabolism
payn01100
Metabolic pathways
payn01240
Biosynthesis of cofactors
Module
payn_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
HMI60_03990 (pdxS)
Enzymes [BR:
payn01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
HMI60_03990 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
IMPDH
NMO
Glu_synthase
TetR_C_27
DHO_dh
TMP-TENI
Trp_syntA
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
QOT20765
LinkDB
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Position
complement(855619..856545)
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AA seq
308 aa
AA seq
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MSTPDVSNEAGSSANSVTGSSRVKRGMAEMLKGGVIMDVVNVEQARIAEDAGAVAVMALE
RVPADIRAQGGVSRMSDPDMIDQIIAAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEV
LTPADYINHIDKWNFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATGHMRK
IRSEIAKLAALPEDELYVAAKELQAPYELVKEIAATGKLPVVLFTAGGIATPADAAMMMQ
LGADGVFVGSGIFKSGNPAERAAAVVKATTFYDDPDVIAKVSRGLGEAMVGINVDEIPQP
HRLAERGW
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacaccagatgtaagcaacgaagccggttcgtccgcgaacagcgtcacgggcagc
agccgcgttaagcggggcatggctgagatgctcaagggcggcgtcatcatggacgtcgtt
aacgtcgagcaggcccgcatcgccgaggatgccggtgcggtcgccgtgatggcgcttgag
cgtgtcccggctgatatccgcgcccagggtggcgtgtcccgcatgtccgatccggacatg
atcgatcagatcatcgctgccgtgtccatcccggtgatggccaaggcccgtatcggccac
ttcgtcgaagcccaggtcctgcagtccctcggtgttgactacatcgatgagtccgaggtc
ctgaccccggcggactacatcaaccacatcgacaagtggaacttcactgttccgttcgtc
tgtggtgccaccaacctgggtgaggcgttgcgtcgcatcaacgagggcgcggcgatgatc
cggtccaagggcgaagccggtaccggggatgtttccaacgccaccggtcacatgcgcaag
atccgttcggagatcgccaagctcgccgcccttcccgaggacgagctgtatgttgcggcc
aaggaacttcaggccccgtacgagctggtcaaggagatcgctgccacgggcaagcttccg
gtggtgttgttcactgccggtggcatcgcgactccggctgatgctgcgatgatgatgcag
ctcggcgccgatggcgtgttcgtcggttcgggtatcttcaagtccggcaacccggcagag
cgtgccgccgccgtcgtcaaggccaccacgttctacgatgaccccgatgttattgccaag
gtctcccgcggcctgggcgaagcgatggtgggcatcaacgtcgacgaaatcccgcagccc
caccgcctcgcagagcgcggctggtaa
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