Paenarthrobacter sp. YJN-D: HMI60_04840
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Entry
HMI60_04840 CDS
T10599
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn00470
D-Amino acid metabolism
payn00550
Peptidoglycan biosynthesis
payn01100
Metabolic pathways
payn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMI60_04840
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMI60_04840
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMI60_04840
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
payn01011
]
HMI60_04840
Enzymes [BR:
payn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HMI60_04840
Peptidoglycan biosynthesis and degradation proteins [BR:
payn01011
]
Precursor biosynthesis
Amino acid ligase
HMI60_04840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QOT20914
LinkDB
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Position
complement(1030119..1031255)
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AA seq
378 aa
AA seq
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MVTEEPTPVKAKPRVAILFGGRSSEHAVSCVTAAGVMGAIDTNKYEVIPIGIAKSGQWVL
ASGDTSQWSLSSRSLPEVAASGQTVTLAEVGGEHQLIVTEPNAVPRELGSVDVVFPLLHG
PWGEDGTIQGLLELSDTRYVGAGVLASAVGMDKHFMKVVFEAAGLKVGPYVAVTDREWVT
DAEAVRKRVDKLGFPVFVKPARAGSSMGISKVDSLDGLDAAVEEARRHDLKLVIEAGIVG
REIECAVLQGRGTDAPRTSMPGEIAVAAGEHDFYDFAAKYVEDGAAALSCPADMPDEAIA
RVRELAAVAFDAVGAEGLSRVDFFYTPSGELIINEINTMPGFTPKSMYPQMWAASGLSYA
ELIDELIHLALTRKTGLR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgaagaacccacacccgtgaaggcgaaaccccgcgtggcgatcctctttggg
ggccgctcaagtgaacacgctgtcagctgcgtcacggcagctggcgtcatgggagccatc
gacaccaacaagtacgaggtcatccctatcggcatcgcgaagtcgggccagtgggttttg
gcttcgggagataccagccagtggtccttgagctccaggtcgcttcccgaggtggcagcg
tcagggcagactgtgacgttggccgaagtcggcggtgagcaccaattgatcgtcacagag
cccaacgccgtcccccgggagctgggctccgttgacgtcgtgttcccattgctgcatggc
ccgtggggtgaggacggaacaatccagggcctcttggagttgtccgacacgcgctacgta
ggcgcaggcgtactggcctccgcagtgggcatggacaagcacttcatgaaggttgtcttc
gaagccgccgggctgaaggtgggtccctacgtagccgtgacggaccgcgaatgggtgacc
gacgccgaggccgtgcgcaaacgcgtggacaagcttggtttcccggtcttcgtcaagccc
gcccgtgcgggttcttccatgggaatttcgaaggttgactccctggacggcttggatgcc
gccgtcgaggaagcccgccgccatgacctgaagctcgttatcgaagccgggatcgtggga
cgcgaaatcgagtgtgccgtcctgcaaggacgcggcaccgacgctccccgcacgtcaatg
cccggtgaaattgccgtggcggccggggaacacgatttctacgacttcgctgccaagtat
gtggaggacggggccgccgcactcagctgcccggccgacatgcccgacgaagccattgcc
cgcgtcagggaactggccgccgtcgctttcgacgccgtaggcgcggaaggcctcagccgt
gtggactttttctacaccccgtccggcgagctgatcatcaacgagatcaacaccatgcct
ggcttcactcccaagagcatgtacccgcagatgtgggcagcctccggactgtcctacgcc
gaattgatcgatgaactgatccacttggcgctgacccggaagacgggcctgcgctaa
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