Paenarthrobacter sp. YJN-D: HMI60_05635
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Entry
HMI60_05635 CDS
T10599
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
payn Paenarthrobacter sp. YJN-D
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
payn03032
]
HMI60_05635
03400 DNA repair and recombination proteins [BR:
payn03400
]
HMI60_05635
Enzymes [BR:
payn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMI60_05635
DNA replication proteins [BR:
payn03032
]
Prokaryotic type
DNA Topoisomerases
HMI60_05635
DNA repair and recombination proteins [BR:
payn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMI60_05635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QOT21056
LinkDB
All DBs
Position
1190280..1191239
Genome browser
AA seq
319 aa
AA seq
DB search
MPRLKRSDLSKPGIVRRKVGTGFSYRHPDGSLVSKEDRQRINALAIPPAWTDVWISPYEH
GHILATGVDAAGRSQYIYHPGWRERKDTEKFIRAAKLGLVLPTVRRNVTVHLQDAADPRQ
QTLAAAVRFMDLGALRVGSEVYMKQNGSYGLTTLRCRHARVEGPDVFLKFPGKSGQLWDT
SIHDPALAAFLEPLADRPGKERLLAYQANGTWVSVDASMINEYLRGISGEAYTSKDFRTW
KGTAAAALCLIKSGHKGTPRQAIVRAIKEASELLGNTPSVARSSYVDPRIIEGYLSEELK
DVKPTEASVAAYLNGETSS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggctgaagagaagcgacctttccaagcccggcatcgtccgccggaaggttggt
acggggttcagctaccgccaccctgacggcagtctggtcagcaaggaggatcgccagcgc
atcaacgcgctggcgatcccgcctgcatggaccgatgtgtggatcagtccctacgagcat
ggccacatcctggccacgggagtggatgctgccggacggagccagtacatctatcaccct
gggtggcgggaacgtaaggacaccgagaagttcatccgtgcagccaaacttggcctggtg
ctgccaacggtccgccgcaacgtgacggtccatctccaggacgccgcggatccccggcag
cagacgctcgcagcagctgtacggttcatggaccttggcgcgctgcgcgtaggttccgag
gtctacatgaagcagaacggttcctacggactcaccaccctccgatgccgccacgcgcgg
gtggagggccctgacgtcttccttaagttccccggcaagagcggccagctctgggatacc
tccatccacgatcccgctttggcggccttcttggagccgctggcggaccgtcccggcaag
gagcggctgcttgcttaccaggccaacggcacctgggtgtcggtggatgcgtccatgatc
aatgaatacctcaggggcatctcaggggaggcgtacacctccaaggatttccggacctgg
aaaggcactgcggccgccgccctctgcctcatcaagtccgggcataagggaacccccagg
caagccattgtgcgggccatcaaagaggcgtccgaactcttgggcaacacgccctctgtg
gcgcgttcctcctatgtggatccgcggattatcgagggctacctctcggaggagctcaag
gacgtcaagccaacggaagcgtcggttgccgcctacttgaacggcgaaacatcgagttaa
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