Paenarthrobacter sp. YJN-D: HMI60_07115
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Entry
HMI60_07115 CDS
T10599
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn03030
DNA replication
payn03430
Mismatch repair
payn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMI60_07115
03430 Mismatch repair
HMI60_07115
03440 Homologous recombination
HMI60_07115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
payn03032
]
HMI60_07115
03400 DNA repair and recombination proteins [BR:
payn03400
]
HMI60_07115
Enzymes [BR:
payn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMI60_07115
DNA replication proteins [BR:
payn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMI60_07115
DNA repair and recombination proteins [BR:
payn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMI60_07115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
DnaX_C
AAA_30
Rad17
AAA_14
AAA_19
Mg_chelatase
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QOT21319
LinkDB
All DBs
Position
complement(1487349..1490669)
Genome browser
AA seq
1106 aa
AA seq
DB search
MTVTTALYRRYRPDSFADVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILA
RCLNCAEGPTDTPCGKCPSCIELARGGSGSLDVIEIDAASHGGVDDARDLRERATFAPVR
DRYKIFIIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPDKVIGTIRSRTHHYPFRL
VPPEPLMHYLEMLCQQENVPVAPGVLSLVIRAGGGSVRDTLSVLDQLMAGAGPNGLDYEL
AVALLGYTHASLLDDIVDAVAAADAATVFRAVDRVIQTGHDPRRFVEDLLERFRDLIIVQ
AMPESAQAILRGMPADQIARMRNQATNLGAAELSRAADVTNTALTEMTGATSPRLHLELL
CARILLPSAEQTERGIAARIDRVERRLNYAGDGGTPAVAAGAPTAAAASAVPPAAAPVTQ
SAPAPTASPTPATEPAAVEQVPAASVPAVPESSTAAGPRDAISAPRVSTNDWPVEERTSS
GRAGQAAAAPSAPSAAAAPTPAQTPQPEPVQASASAAPQTQPSQATPPAAPSQPAPSQPA
PSQPAPSQAMPSQAVPQAQPSPAASQAPASAPQPAAAPAPSAGGSGDVEALRRAWPDVLQ
TLTKIKRSTWALVEPNAQVAQFDGQVLTLAFTTGGLAGAFGRADHSENLRQAIHKTIGID
CQIVAVAGGNSSASSEPNPKAPTSRESPAASTPTAAPAPAPVSSVDSAWGLAPATPASGT
VPSAGPHAGTVASSAPSRAADVAPAEQPQPPATPVPAAASVPATTAPAQATGQTPTPASA
PAPATTPTPTRPPAPAQAAPVPVPAVVETAPSSAGEYSYPDDDWGPPLDEDAPPLEEEPP
ADWEPPYGHQGEPRSYPQAASASSAAPTPAPAPAPAPAPASAPTRTAAPQATTAHVSSDD
PWSRAVEQAPGTWVVGTESNVGKNPQAAEETVVPAADTPDYEPAAAQVPEPAPAASYGHP
TNAEENPSSSWDVAPASNWPGTQAPSAAVSGAPAAGSIPTWPSLATQPEEARGSVATLED
DAPSGNPNGRQSLYQRLTNSPEAQAGRVQAPVRAQAAPAAAPEDIPSPEDETIEESRVFG
RAAVERILGGKLIEERALDGSPLQTR
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttacaactgccctgtatcgaaggtatcgcccggactctttcgcggacgttatc
gggcaggaacacgtcacagagccactgatgacggcactccggaagaaccgcgtgaaccac
gcctacctcttctccggtccgcgcggctgtggcaagaccacctccgcgcgcatcctggca
cgctgcctgaactgcgccgaaggccccactgacacgccttgcggcaagtgccccagctgc
atcgaacttgcccgcggcggctcgggctccttggacgtcatcgagatcgatgccgccagc
cacggtggcgtggacgatgcccgcgatcttcgtgagcgcgccaccttcgccccggtccgg
gaccgctacaagattttcatcatcgacgaggcccacatggtcacgtctgccggcttcaac
gctctgctgaagattgtggaggagccgccggaacacatcaagttcatcttcgccaccacg
gagccggacaaggtcatcggcaccatccgctcccgcacgcaccactaccccttccggctg
gtgccacccgagccgctgatgcactaccttgagatgctctgccagcaggagaacgttcct
gttgcccccggcgtgctctcgctcgttatccgcgctggcgggggttctgtccgggacacc
ctttcggtgctcgatcagctcatggccggcgccggccctaacggcctggactacgagctc
gccgtggcgctgctcggctacacccacgcttcgttgctggacgacatcgtcgacgccgtc
gctgccgccgacgccgccaccgttttccgcgccgtggaccgcgtcatccagaccggccac
gacccccggcgcttcgtcgaggacctgctggagcgcttccgcgacctcatcatcgtgcag
gcgatgcccgaaagcgcccaggccatccttcgaggaatgcccgccgatcagatcgcccgc
atgcgcaaccaggcaaccaacctgggcgcggctgagctgtcccgggccgcggacgtcacc
aacaccgcgctcacggagatgacgggcgcaacctcgccccggctccaccttgagctgctg
tgcgcgcgcatcctgctccccagcgctgaacaaaccgagcgtggtatcgccgcgcgcatc
gatcgcgtggaacgtcgcctgaactacgcgggcgacggcggcacaccggctgttgctgcc
ggcgcgcctacagctgcggctgcttcggctgttccgccggcggccgcgcccgttacacag
tcggccccggcccccacggcttctcccacacctgcaactgagcccgcagcagtcgagcag
gtccctgcggcttcagtccctgccgttcccgaatcatccaccgcagctggtccgcgcgat
gccatctcagcaccgagggtgtccaccaacgattggcccgtcgaggaacgtacgtcttcc
ggtcgcgctggccaggccgctgcggccccgtctgctccgagtgctgcggctgctccgacc
ccggcacaaaccccgcagcctgagcctgtccaggcatctgcttccgcagcgccgcagacg
cagccatcacaagcaacgcccccggcagcgccgtcgcaaccagcgccgtcacaaccagcg
ccgtcacaaccagcgccgtctcaggcgatgccctctcaggcagtgccgcaggcacagccg
tccccggccgcatctcaggcacctgcgtcagcgccgcaacctgcggctgccccggctccg
agtgctggaggcagcggggacgtcgaggcccttcgccgggcatggccggatgtgctccaa
acgctgaccaagatcaagcgcagcacgtgggccctcgttgagcccaacgctcaagttgcc
cagttcgacggccaggtgctgaccctcgcgttcaccaccggcggccttgctggtgccttt
ggacgcgcagaccactccgagaacctacgccaggcaatccacaagaccatcggcatcgac
tgccagatcgtcgcagtggccggcggcaacagttcagcgagctctgagccaaacccaaaa
gcgcctactagccgggagagtccggctgcttcaacgccaacggctgccccggcaccggct
ccggtgtcttcggtcgactcggcgtggggcctcgctccagccacccctgcctcggggacc
gttccatcggccggccctcacgcgggcacagttgcgtcctcggcgccatcccgtgcagct
gatgtggctcctgcagagcagccccagccaccggcgacccccgtcccggcagcagcatca
gttcctgccactacggcgccggctcaggcaaccggtcagacgcccactccggcttctgct
cccgctccagctacaacaccgacaccgacacgaccaccggcccccgctcaggctgcgcct
gtgcctgtgcctgccgtcgtcgagaccgctccctcctccgccggagagtactcctaccct
gacgacgactggggtccgcccctggacgaggacgcccctccactggaggaagagccgcca
gctgattgggagccaccgtacggccaccagggggaaccccggagctacccacaagcagcc
tccgcctcctctgccgccccaacacctgcaccagcaccagcacctgcaccagcaccagca
agcgcgcccacacgcacagccgcgcctcaagccaccacggcacacgtctcctcggatgac
ccgtggtcccgcgcggtggaacaagctccgggcacgtgggtggtcggcacggaatccaac
gtcggcaaaaacccgcaggcagcagaagaaaccgtcgttccagcagcggacaccccggac
tatgagcccgccgcggcacaggtcccggagccggcccccgccgcatcgtacggtcaccca
accaacgccgaagagaacccaagctccagctgggacgtcgcaccggcgtcgaactggcct
ggaactcaggcgcccagcgcggccgtttcgggtgcaccggccgccggcagcatccccacg
tggccgtcgttggcgacccaacctgaggaagcacgcggttccgtcgccacgctcgaggac
gacgcgccgtcgggcaatccgaacggacgccagagcctgtaccaacggctcactaacagc
cccgaagcccaggcaggacgtgtgcaggcgcctgttcgggcgcaggcagcgccggccgcc
gcgccggaggacattcccagtcccgaggacgaaaccatcgaagagtcgagggtctttggg
cgggctgcggtggagcgtattctgggcggaaagctgatcgaagagcgcgccttggacggt
tctcccctgcaaacccgctga
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