Paenarthrobacter sp. YJN-D: HMI60_09980
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Entry
HMI60_09980 CDS
T10599
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn00260
Glycine, serine and threonine metabolism
payn00460
Cyanoamino acid metabolism
payn00630
Glyoxylate and dicarboxylate metabolism
payn00670
One carbon pool by folate
payn00680
Methane metabolism
payn01100
Metabolic pathways
payn01110
Biosynthesis of secondary metabolites
payn01120
Microbial metabolism in diverse environments
payn01200
Carbon metabolism
payn01230
Biosynthesis of amino acids
payn01240
Biosynthesis of cofactors
payn04981
Folate transport and metabolism
Module
payn_M00140
C1-unit interconversion, prokaryotes
payn_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMI60_09980
09102 Energy metabolism
00680 Methane metabolism
HMI60_09980
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HMI60_09980
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HMI60_09980
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HMI60_09980
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HMI60_09980
Enzymes [BR:
payn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HMI60_09980
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
SelA
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QOT23804
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Position
2114343..2115647
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AA seq
434 aa
AA seq
DB search
MSVTTTTSASVSNQSLAELDPEIAAVLDQELGRQRGTLEMIASENFAPRAVMEAQGSVLT
NKYAEGYPGRRYYGGCEYVDVAEQLAIDRVKELFGAEYANVQPHSGAQANAAALSAMINP
GDKILGLSLAHGGHLTHGMKLNFSGKLYNVAAYQVEEDNFRIDMDKLREQAIAEKPQVII
AGWSAYPRHLDFAAFRSIADEVGALLWTDMAHFAGLVAAGLHPSPVPHSDVVTSTVHKTL
AGPRSGVILGKQEWAKKLNSSVFPGQQGGPLMHVIAAKAVAFKIAGGEEFKERQERVLEG
AKVIADRLNQADVAEAGVSVLTGGTDVHLVLVDLRNSQLDGQQAEDLLHSVGITVNRNSV
PFDPRPPMVTSGLRIGTPALATRGFGADEFTEVADIIATALVKGAAGSVDAEALQARVDK
LADNFPLYPQHEQW
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atctccgtgactaccaccacttcagcgtctgtcagcaaccagtcgctcgccgaactcgat
cccgagatcgcagcagtcctcgaccaggagcttggccgccagcgcggcaccctggaaatg
attgcctccgaaaacttcgccccccgcgctgtgatggaagcccagggctccgtcttgacc
aacaagtatgccgagggttacccgggccgccgctactacggcggttgcgaatacgtcgac
gtcgctgagcagctcgccatcgaccgggtcaaggaactcttcggcgccgaatacgccaat
gtccagccccactccggtgcccaggcaaacgctgcagcactgtccgccatgatcaacccg
ggcgacaagatcctcggcctgtccctggcccacggcggacacctgacccacggcatgaag
ctcaacttctccggcaagctctacaacgtagcggcctaccaggtggaagaggacaacttc
cgcatcgacatggacaagctccgcgagcaggccatcgccgagaagccgcaggtcatcatc
gcaggctggtctgcctacccgcgccacctcgatttcgcagctttccgttccatcgccgac
gaagtcggtgcgctcctctggaccgacatggcgcacttcgcaggccttgtagcagcagga
ctgcacccgagcccggtgccgcactccgacgtcgtcacctccacggtccacaagaccctg
gcaggtccgcgttccggcgtgatcctgggcaagcaggagtgggccaagaagctcaactcc
agcgtcttcccgggccagcagggcggcccgctcatgcacgtcatcgcagccaaggccgtt
gccttcaagatcgccggcggcgaagagttcaaggaacgccaggagcgcgtccttgagggc
gccaaggtcatcgctgaccgcctcaaccaggccgacgtcgccgaagccggcgtctcggtc
ctgaccggcggcaccgacgtccacctggtcctggttgacctgcgcaactcccagttggac
ggccagcaggccgaagacctcctgcactcggtgggcatcaccgtgaaccggaactccgtt
ccgttcgatccccgcccgccgatggtcacctccggcctccgcatcggtacgcccgccctg
gctacccgcggtttcggtgccgacgagttcaccgaggttgccgacatcatcgccaccgca
ctcgtaaagggcgccgccggcagcgttgatgcagaggccctccaggcacgcgtcgacaag
ctcgccgacaacttcccgctgtacccgcagcacgagcagtggtaa
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