Paenarthrobacter sp. YJN-D: HMI60_10480
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Entry
HMI60_10480 CDS
T10599
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn00061
Fatty acid biosynthesis
payn00071
Fatty acid degradation
payn01100
Metabolic pathways
payn01212
Fatty acid metabolism
payn02024
Quorum sensing
payn04146
Peroxisome
Module
payn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HMI60_10480
00071 Fatty acid degradation
HMI60_10480
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HMI60_10480
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMI60_10480
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
payn01004
]
HMI60_10480
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
payn04147
]
HMI60_10480
Enzymes [BR:
payn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HMI60_10480
Lipid biosynthesis proteins [BR:
payn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HMI60_10480
Exosome [BR:
payn04147
]
Exosomal proteins
Exosomal proteins of breast milk
HMI60_10480
Exosomal proteins of breast cancer cells
HMI60_10480
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QOT21926
LinkDB
All DBs
Position
complement(2217894..2219726)
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AA seq
610 aa
AA seq
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MREASTELLFEADTDSNVTDLLLERCAKDPFGVLYAHNTPNGWLNVSAARFLADVTALAK
GLIAGGLTPGDPVAVLSRSSFEWTLVDFAIWMAGGVTVPIYETSSASQIEWILADSGARR
IFVEDASKAALVHSVVEKSGLLGEDPVAIIRMEHDGDAPNLTSVSAVGIGVMDAELERQR
STAKLADIASIVYTSGTTGKPKGCEITHGNFVLVARNVIPFLPELLMQPGARTLMFLPLA
HVLARAVQVVCLTAGITLGHSAGASGLMADLGSFKPTFLLAVPRIFEKVYAGASHKAAMS
GKSALFSAASSTAVEYSTAVDLASRGEGPGPGWLLRTKHRTFDKLLYPRVREVFGGDVGY
TVSGASPLSPRDNHFFHGAGVPVLEGYGLTETTAPCTVNTPTMSRIGTVGIPLPGTTIRV
ADDGEVLVKGIGVFKGYHGNPEATEAAFVDGFFRTGDLGELDSDGFLTITGRKKDLLVTA
GGKNVAPGPLEEKLREHPLVGQAVVVGDGRPFVAALISLDPEGLADWCSENKTGALSLEE
AVRDDRVKAAVQSAVDEANKLVSAAESIRKFAFITAELSVESGHLTPSLKLKRAAVVGDF
ASIVEKLYAK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagggaagcaagcacggagctcctcttcgaagccgacacggactccaacgtcaccgac
ctccttctggagcggtgcgccaaggatccgttcggcgtcctgtacgcgcacaacaccccc
aacgggtggctgaacgtgtcagctgccaggttcctggcggacgtcaccgccctggccaag
ggcctcatcgcaggcggcctcaccccaggtgaccctgtggcggtgctgtcacgttcgagc
ttcgaatggaccttggtggacttcgccatctggatggcgggcggcgtcacggtgcccatc
tacgagacctcctctgccagccagatcgaatggatcctggctgattccggagcccgccgc
atcttcgtggaggacgcctcaaaggccgcgctcgtccattccgtcgtggaaaagtcaggc
ctcctcggcgaggaccccgtcgccatcatccggatggagcacgacggtgacgcacccaac
ctgaccagtgtgtccgccgtcggcatcggcgtcatggacgctgagctggagcggcaacgc
agcacggcaaaactggccgacatcgcctccatcgtttacacctcaggcaccacaggcaaa
cccaaagggtgcgaaatcacccacggcaactttgtgctggtggccaggaacgttattccg
ttcctcccggagcttttgatgcagcccggcgcgcggaccctcatgttccttccgcttgcc
catgtcctggccagggctgtgcaggttgtttgcctcactgccggtatcaccctggggcac
agcgccggtgccagcggtctgatggcggacctgggttcgttcaagccgacgttcctgctt
gcggttccccggatcttcgagaaggtctacgccggggccagccacaaggccgcaatgtca
ggcaagtccgccctcttctcggcggcttcttcaacagcggtggaatattcgacggcggtg
gacctcgcctcccgcggtgaggggccgggtccgggttggctgctgagaaccaagcacagg
accttcgacaaactcctgtatcccagggtgcgggaagtctttggcggcgatgtcggctac
acggtgtccggcgccagtcccctgagcccacgggacaaccacttcttccacggtgccggg
gttcccgtcctggagggctacgggctgaccgagaccacggcgccctgcacagtgaacacc
cccaccatgtcccggatcggaacggtgggcatcccgttgccgggcaccaccatccgcgtg
gccgacgacggtgaggtgctggtcaagggcatcggagtgttcaagggctaccacggaaac
ccggaggccacggaggccgcctttgtggacgggttcttccgcacaggggacctgggcgag
ctcgactccgacggcttcctgaccatcaccggccgcaagaaggatctcctggtgacggcc
ggcggcaagaacgtcgctcccggccccctggaagaaaagttgcgcgaacacccgttggtg
ggtcaggccgtggtggtcggagacgggcgtccttttgtggcggccttgatcagtctcgac
cccgagggccttgcggattggtgctcggagaataaaaccggtgccctgtccctcgaagaa
gcagtccgcgacgaccgcgtcaaggcggccgtgcagtctgctgttgatgaggccaacaag
ctcgtctcggccgccgaatccatcaggaagttcgctttcatcacggcggagctcagcgtc
gagtccggacacctgactccgtcactcaagctcaagcgggcggctgtggtgggagacttc
gcgtcgattgtcgaaaagctatacgccaagtag
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