Paenarthrobacter sp. YJN-D: HMI60_11600
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Entry
HMI60_11600 CDS
T10599
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
payn Paenarthrobacter sp. YJN-D
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
payn03016
]
HMI60_11600 (truB)
Enzymes [BR:
payn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMI60_11600 (truB)
Transfer RNA biogenesis [BR:
payn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMI60_11600 (truB)
Prokaryotic type
HMI60_11600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QOT22128
LinkDB
All DBs
Position
2492132..2493109
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AA seq
325 aa
AA seq
DB search
MGAILATHILVSVLSGLVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVL
GINKATRLLTYIVGTSKTYTATIRLGETTITDDAEGDVTEARSAAAVTDDAIAAGVAALT
GPIQQVPSSVSAIKVNGERSYARVRSGEEVKLAARPVTIHRFDIHAVTRVDGGRVVDVDV
TVECSSGTYIRALARDLGNALGVGGHLTALRRTQVGPYSIEQARTLEELAEELEVLDMSL
AARALMPNRELSDDETTEISFGRRIAAGPGAGTPDAATAEKPAAAFAPSGELVALLADTG
TFAKPVLVFAPGTGAGTGAGAGQAQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggagccatcctagccacccatatactggtaagcgtgctttctggactggtaatcgtt
gacaaaccgcagggatggaccagccatgatgtggttggccggatgcggcggctggccggc
acccggaaagtggggcatgccgggacgctagatcccatggccacgggggtactggtgctt
ggcatcaacaaagccacccggctcctgacctacatcgtgggcacgtccaaaacctacaca
gccaccatcaggctcggtgaaaccaccattaccgatgacgccgagggtgacgtcaccgag
gcccgcagcgctgctgccgtcaccgacgacgccattgcagccggagtagcggccctgacg
ggccccatccagcaggtgcccagcagcgtcagcgccatcaaagtgaacggtgagcgctct
tacgcccgggtccgctcgggggaagaggtcaaactcgctgcccgcccggttaccatccac
cgcttcgacatccacgcggtcaccagggtcgacggcggcagggtagtcgacgtcgacgtc
accgtggaatgttcttccggcacgtacatcagggccttggcccgcgacctcggcaacgcc
ctgggcgtcggcggacacctcacggccctgcgtcgtacccaggtgggaccgtactcgatc
gagcaggccaggacgctggaggagctggcggaagaactcgaggtcctcgacatgtcactg
gccgcacgtgccctcatgcccaaccgggaactgagcgacgacgaaaccacggagatctca
ttcggccgccgcattgctgccggcccgggtgcaggcaccccggatgctgccacggccgag
aagcccgccgcagcgttcgcgccgtcgggagagttggtcgctttgctcgccgataccgga
actttcgccaagccggtcctggtctttgccccgggaacaggcgcgggaacaggcgcggga
gcggggcaggcgcagtag
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