Paenarthrobacter sp. YJN-D: HMI60_11980
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Entry
HMI60_11980 CDS
T10599
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMI60_11980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
payn03000
]
HMI60_11980
03400 DNA repair and recombination proteins [BR:
payn03400
]
HMI60_11980
Enzymes [BR:
payn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HMI60_11980
Transcription factors [BR:
payn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HMI60_11980
DNA repair and recombination proteins [BR:
payn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMI60_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QOT22197
LinkDB
All DBs
Position
complement(2570361..2571887)
Genome browser
AA seq
508 aa
AA seq
DB search
MDFWQRYRAIDARDTRFDGQFFTAVRSTGIYCRPSCPARTPKAENVTFYETSAAAHEAGY
RACKRCLPEAVPGTPAWNLRSDIAGRAMRLINDGVITREGVDGLAHRLGYSARHLNRILS
HELGASPLSLARASRAQTARTLLVSTDMLLADVAFASGFNSVRQFNDTIGEVFAMTPTAL
RATGAKTGLRRGSGVSEATPSALTLNLPYREPFDPGIFDFLAVRAVPGIESADTSADGTR
SYARTLRLPRGNASFSVSFNPESRGKPLQLTVNALDLHDLPALLSRVRRLFDLDADPQAI
DDALAIDPRLSGRIPAIPGIRVPGAVDPQELLIRAMIGQQITVAAARTALTQLSDAGSPA
GVGGPGLDRLFPTAAELAEHGRALLRGPRRRIDSIVSAAEAMATGTLDFDYGDDVESLGR
KLLPLPGVGPWTVGYVAMRVLGAPDILLANDAAVRNGLKVLPSGAGLSADFREVSPWRSY
ATMHLWRAAAKPVAVHPSRTAAVVGTHA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggacttctggcagcgctaccgggcaatcgacgcccgcgacacccggttcgacggtcaa
ttcttcacagccgtcaggtccaccggcatctattgcaggccatcctgtcccgcccggaca
cccaaggccgagaacgtcacgttctatgaaacatcggcggcagcgcacgaggccggctac
cgggcctgcaagcgatgcctgcccgaagcggttcccgggacgcccgcgtggaacctccgt
tccgatatcgccggccgcgccatgcgattgatcaacgacggtgtcataacccgcgaaggc
gtcgatggcctggcgcaccgtttggggtactcagcccgccatctcaaccgcatcctcagc
catgaactgggcgcgagcccgctctcccttgcacgggcaagcagagcgcagacggccagg
accctgttggtctctacggacatgcttctggcagatgtcgcattcgcttccgggttcaac
agcgtgcgccaattcaacgacaccatcggtgaagtgttcgccatgaccccgacggcgtta
cgcgccaccggggcgaagaccggcctgcgccgtggttccggggtttcggaggccacgccc
tcggcgctgacactgaacctgccctatagggaaccgttcgaccccggaatcttcgacttc
ctggcagtacgcgcagttcccggcatcgagtctgcggacacctcggcggacggaacccgg
agctacgcacgcaccctgcgcctgcctcgaggcaacgcatccttctctgtctccttcaac
cccgaatcccgtggaaagcccctgcaactgacggtcaacgccctggatctccacgacctc
ccggcactgttgagccgggtccggagactgttcgacctcgacgccgatccgcaggcgatc
gatgacgcccttgccatagacccccgtctgtccggcagaatcccggccattcccggtatc
cgggttcccggcgcggtggatccccaggaactgctgatccgggcgatgatcggtcaacag
atcaccgtcgccgccgcccgcacggccctcacacagttgtcggacgccggctcccccgcc
ggtgtgggcggaccgggtttggatcgactgtttccgacggcggcagaactcgccgagcac
ggccgggccctgctccggggaccccggcgtcgcatcgactccatcgtgtcagctgcggag
gccatggctaccgggacacttgatttcgactacggcgacgacgtcgaaagccttggacgc
aagctgctccccttgcccggggtggggccgtggaccgtgggatacgtcgcgatgcgcgtg
ctcggcgctccggacattctgctggccaacgatgctgcggtccggaacggcttgaaggtc
cttccgtcaggggcgggactcagtgccgacttccgggaagtcagcccttggcgctcctac
gccaccatgcatttgtggcgtgcggcggcaaagcccgttgcggtccatccctcccgcacg
gcagccgtcgtcggcacccacgcctag
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