Paenarthrobacter sp. YJN-D: HMI60_13310
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Entry
HMI60_13310 CDS
T10599
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn00860
Porphyrin metabolism
payn01100
Metabolic pathways
payn01110
Biosynthesis of secondary metabolites
payn01120
Microbial metabolism in diverse environments
payn01240
Biosynthesis of cofactors
Module
payn_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HMI60_13310 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
payn04147
]
HMI60_13310 (hemB)
Enzymes [BR:
payn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
HMI60_13310 (hemB)
Exosome [BR:
payn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HMI60_13310 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
SH3_6
DUF5707
Motif
Other DBs
NCBI-ProteinID:
QOT22435
LinkDB
All DBs
Position
complement(2879687..2880667)
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AA seq
326 aa
AA seq
DB search
MSFPNHRPRRLRTTAAMRRLTAENRLAPADLILPAFIREGLTEPSPISSMPGVVQHTTDS
LKRAAAEAVELGVGGIMLFGVPAVRDARGTASLDPDGVLNKAIRDVKAEVGDDLVIMGDV
CLDEFTDHGHCGVLDAEGYVDNDATLEIYGRMAVAQAEAGAHVLGPSGMMDGQIAVIRQA
LEESGNKNTAVLAYAAKYASAFYGPFREAVDSQLKGDRRTYQMDAANRREAILEVELDLE
EGADMVMVKPAMSYLDILADVAAMSPVPVSAYQISGEYAMIEAAAANGWIDRRGAITESV
LGIKRAGADTVLTYWASELAGWLKES
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagctttccgaaccatcgtccccgccgcttgcgcacgactgccgcgatgcgccggctc
acagcagaaaacaggttggctccggccgacctgatccttccggcgttcattcgtgaaggc
ctcacggaaccgagccccatcagctccatgcccggcgtcgtccagcacaccaccgattcg
ttgaagcgcgcagccgccgaagctgtggaactgggcgtgggcggcatcatgctgttcggc
gtacctgcggtccgcgatgcccggggcacagcctccctcgatcccgacggcgtcctgaac
aaagccatccgcgacgtcaaagccgaagtcggcgatgacctggtgatcatgggcgatgtc
tgcctggacgaattcaccgatcacggccactgcggcgtgctggatgccgaaggctacgtg
gacaacgacgccaccttggagatctacggccggatggccgtagcccaggcagaagcaggt
gcgcacgtgctgggcccgtcgggcatgatggacggccaaatcgccgtcatccgccaggct
ctggaggaatcaggcaacaagaacacagcggtgctggcttacgccgccaaatacgcgtcc
gcgttctacggcccgttccgtgaggctgtcgattcccagctcaagggcgaccgccggacc
taccagatggatgccgccaaccgccgggaggccatcctggaagtggagctggacctcgaa
gaaggcgcggacatggtcatggtcaagccggccatgagctacctggacatcctggctgac
gtggctgccatgagtcccgtgccggtctcggcctaccaaatctcgggcgagtacgccatg
atcgaagcggctgcggccaacggctggatcgacaggcgcggcgccattaccgaatccgtg
ctcgggatcaagcgcgccggagccgataccgtccttacttattgggcctccgaactggca
ggctggctgaaggagtcctga
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