| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
payn Paenarthrobacter sp. YJN-D
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:payn00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMI60_14340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:payn03021]
HMI60_14340
03400 DNA repair and recombination proteins [BR:payn03400]
HMI60_14340
Enzymes [BR:payn01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMI60_14340
Transcription machinery [BR:payn03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMI60_14340
DNA repair and recombination proteins [BR:payn03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMI60_14340
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3087170..3091069)
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| AA seq |
1299 aa
MSSESSFGLMQIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDTESRHAELPNLQVEHDLEKKQMIDNRDSDIATIARDLEDE
LARLEGEGAKAADKKKARDSADRQMANVRKRADADIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGLYFEGSMGAEAIKKRLETFDMQAEAESLRDTIQNGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRVGSAGEGR
IFSSVSEAIMAYDARELHLNSQVKIRLDDFVPYAGWEAPEGWEPGQPALVETSLGQVIFN
QTLPEDYPWVEAVADKGELSRIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPTSKPAILAGYENMAAKIQGQYDKGLIDDDERRQELIEIWNKATNEIAQAMRDSLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTPIAVPDSNGELVLDE
NVENSAYARTLAVDVVDAQGNVLAAGGTDCGDVVIDQLLAAGITEVKVRSVLTCESKVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSAGGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRITIEESERQMRLVITPDDGSEEIAYPVLRRSRLLIED
GEHVSVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGDSDLLPGELAERARFEDENRRVVSEGKSPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAS
LFTGPSAFTDFSYDALGGDGAPEFHAIPLDDYDLGNDFR |
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| NT seq |
3900 nt +upstreamnt +downstreamnt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggaagacatc
cgtggctggtcttacggtgaggtcaagaagccggaaaccatcaactaccgcacgctcaag
cctgagaaggacggcctcttctgcgagaagatcttcggcccgtcccgcgactgggaatgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatttgcgagcgttgtggcgtt
gaagtcacccgcgccaaggtgcgtcgtgagcgcatgggccacatcgaactggccgcgcct
gtaacccacatctggtacttcaagggcgttccctcgcgcttgggctaccttttggacctg
gcaccgaaggaccttgagaaggtcatctacttcgctgcctacatgatcaccagcgttgac
accgaaagccgtcacgccgaactgccgaacctccaggttgagcacgaccttgagaagaag
cagatgatcgacaaccgcgacagcgacatcgccacgatcgcccgcgaccttgaagacgag
cttgcccgtctcgaaggcgaaggcgccaaggctgccgacaagaagaaggcccgcgactct
gccgaccgccagatggcgaacgtccgtaagcgtgccgacgccgacatcgagcgccttgag
caggtctgggaccgcttcaagaacctcaaggtcgccgaccttgaaggcgacgagggcctg
taccgcgaactgcgcgaccgttacggtctgtacttcgagggctccatgggcgccgaggca
atcaagaagcgcctcgaaacctttgacatgcaggctgaagccgagtccctgcgcgacacc
atccagaacggcaagggtcagcgcaagacgcgtgccctgaagcgcctgaaggttgtcaac
gcattcctgaccaccaacaacagccccctgggcatggttctggacgccgtcccggtgatc
ccgccggaactgcgcccgatggtccagctggatggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgcctcaagcgactgcttgacctg
ggtgctccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggccgtcgtggccgccccgtcacgggtccgggcaaccgtcccctgaag
tccctgagcgacatgctcaagggcaagcagggccgcttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgttgtcggtccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcccagaacatcaagtcggcgaagcgcatggttgagcgttaccgt
ccgcaggtctgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacctaccctgcaccgcctcggcatccaggccttcgaaccgcagcttgtggaaggcaag
gcaatccagcttcacccgctggtttgtggcgccttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgagcccggaagcccaggccgaagcacgcatcctgatgctg
tcctcgaacaacatcctgaagccgtccgatggccgcccggtgaccctgccttcgcaggat
atgatcatcggtctctaccacctgaccaccaagcgtgtcggttctgccggcgaaggccgt
atcttctcctcggtttcggaagcaatcatggcgtacgacgcccgtgagctgcacctgaac
tcccaggtcaagatccgcctggacgacttcgtgccgtacgcaggttgggaagctccggaa
ggttgggagcccggtcagccggctctcgttgaaacctccctcggccaggtcatcttcaac
cagacgctgcctgaggattacccctgggttgaggctgttgccgacaagggcgaactgtcc
cggatcgtcaacgaccttgcagagcgctacccgaaggttgttacggcggcaacgctggat
aacctgaaggatgccggtttctactgggccacccgttcgggtgtcactgtggcaatctcc
gacatcgaggtgccgacttccaagcccgccatcctggctggttacgagaacatggctgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcgccaggaactg
atcgagatctggaacaaggcaaccaacgagatcgcccaggcgatgcgcgacagcctgtcc
ccgatgaacaccatcaaccgcatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgccagatcgcgggtatccgtggtcttgtggccaacccgaagggtgagatcattcctcgc
ccgatcaagtcctcctaccgtgagggcctgtcggttctggaatacttcatcgccacgcac
ggtgcccgtaagggtctggccgataccgctctgcgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtttcgcaggacgtcatcgtccgtgaagaggactgtggcactgag
cgcggtctggtcaccccgatcgccgtgccggattccaacggtgagctcgtcctggacgag
aacgtcgagaacagcgcctacgcacgtacgctggctgtcgacgtcgtcgatgcccagggc
aacgtcctggctgccggcggcaccgactgcggcgacgtcgtcatcgaccagctgctggct
gcaggcatcaccgaggtcaaggtccgctccgtactcacctgtgagtccaaggtcggcacc
tgcgcgctctgctacggccgttcgctggccaccggcaagaccgttgacatcggcgaggct
gttggcatcatcgccgcgcagtccatcggtgagcccggtacccagctgaccatgcgtacg
ttccacaccggtggtgctgtttccgccggtggtggcgacgacatcacccagggtctgccc
cgtatccaggagctcttcgaagcccgtactccgaagggtgtcgcaccgattgctgaagca
gccggccgcatcaccatcgaagagtccgagcgccagatgcgcctggtcatcactccggac
gatggttccgaagagatcgcctacccggtgctgcgccgttcccgcctcctcatcgaggat
ggcgagcacgtcagcgtcggccagaagctgatcaacggtccggtggacccgaagcaggtt
ctgcgcatcatgggcccgcgtgccgcacagaagttcctcgtggacgaagtgcagggcgtt
taccgcagccagggtattggtatccacgacaagcacgtcgaggttatcgtccgccagatg
ctgcgccgcgtgaccgtcatcgagtccggcgactccgacttgctccccggtgagcttgca
gagcgcgcccgcttcgaagacgagaaccgccgcgtcgtgtccgagggcaagtccccggct
tcgggtcgtccggaactcatgggtatcaccaaggcttccttggctaccgagtcctggctg
tcggcagcttccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgatcctctgctcggcctgaaggaaaacgtcatcatcggtaagctcatcccggctggt
acgggtctgccccgctacacagaggtcactgtggagccgacggaagaagcaaaggcaagc
ctgttcacgggccccagcgctttcaccgacttctcctatgacgccctgggtggcgacggc
gctcccgagttccacgccatcccgctggatgactacgatctcggcaacgacttccgctag |
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