Paenarthrobacter sp. YJN-D: HMI60_14655
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Entry
HMI60_14655 CDS
T10599
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn03018
RNA degradation
Brite
Enzymes [BR:
payn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HMI60_14655
Messenger RNA biogenesis [BR:
payn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMI60_14655
Ribosome biogenesis [BR:
payn03009
]
Prokaryotic type
rRNA helicases
HMI60_14655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QOT22677
LinkDB
All DBs
Position
complement(3152039..3154225)
Genome browser
AA seq
728 aa
AA seq
DB search
MTENLNENFDARNTDSAETAEVTAPAEAEAPAAAAAPVETAAAESAAPAFTEAPAPKAEE
TEAPAPKAEEEEEEGVKFVDLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLA
QTGTGKTAAFAVPALSRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDF
TVLPVYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHIAKGSLDLSELQYLVLDEADEMLRM
GFADDVEQIFQQTPESRQVALFSATMPGQIRRMSKQYLNNPAEISVKSKTTTGANTKQRY
LQVMGPHKLDALTRILEVEDFDGVIAFVRTKMATEDLADKLKSRGFQAAAINGDIPQQQR
ERTVDALKEGRIDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRSGD
AILFMTPREKYLLRSIEKATRQPVEQMHLPTAETVNTLRLGKFAERITETLASEDVAAFR
DLIASYEEEHNVPASEIAAALAVMAQGGQPLLVKELPAAPEYQKRERSKDGFGSRGPTRA
LTEGNATYRIAVGRRQRVMPGSIVGAIANEGGISSAQIGGIDIRSDHSLVELPADLSPEQ
LRALSRTRIGGELIHLELDNGRRPNSERGGYSGGGRGGYGDRENRGGGNFKGNGGFKKEF
RKSDGERSSADRGGRSYSDRTERTAGSYGDRDRGQASGSRFGGHGDGARKPRTGGEGSNR
DFNRKGKW
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaatctcaacgaaaacttcgacgcacggaacaccgactccgctgaaacagca
gaggtcaccgcacccgccgaagctgaagcaccggctgctgccgctgcccccgtcgagact
gccgcagctgagtctgcagcccccgccttcaccgaagctcctgcccccaaggcagaagag
accgaagctcctgcccccaaagcagaagaagaggaagaagaaggcgttaagttcgtcgat
cttggtatcgatggccgcgttctggccgccctgcaggatgtcggctacgaaaagccgtcc
cccatccaggcagccaccatccccctgctgcttgaaggccgcgacgtcgtcggtctcgcc
cagaccggtaccggcaagaccgcagctttcgctgttcctgccctttcccgcctggccgaa
ctccacgacctcaacggcccgtcccgcaagacccaggccctggtcctggctcctacgcgt
gaactggccctgcaggttgccgaggcgttcacttcctacgccaagcacattgatgacttc
acggtcctcccggtgtacggtggctcggcttacggcccccagctcgccggcctgcgccgc
ggtgcccaggttgttgtcggtacccccggccgcgtgatcgaccacatcgccaagggttcg
ctggacctctccgagcttcagtacctcgttcttgacgaagctgacgaaatgctgcgcatg
ggcttcgccgatgacgtggagcagatcttccagcagacccccgagagccgccaggttgcc
ctgttctctgccaccatgccgggccagatccgccgcatgtccaagcagtacctgaacaac
cctgccgaaatctccgtgaagtcgaagaccaccacgggtgccaacaccaagcagcgttac
ctccaggtcatgggcccgcacaagctggacgccctgacccgcatccttgaggttgaagac
ttcgacggcgtcatcgccttcgtgcgcaccaagatggctaccgaggaccttgccgacaag
ctgaagtcccgtggcttccaggctgccgccatcaacggcgacatcccgcagcagcagcgc
gaacgcactgttgacgcgctcaaggaaggccgtatcgacatcctggtagctaccgacgtc
gcggcccgtggccttgacgttgagcgcatcagccacgtcatcaactacgacatcccccac
gacaccgagtcctacgtgcaccgcatcggccgcaccggccgtgcaggccgttccggtgac
gcgatcctcttcatgacgccgcgtgagaagtacttgctgcgttccatcgaaaaggccacc
cgccagccggtggagcagatgcacctgccgaccgcggagaccgtcaacacacttcgcctg
ggcaagttcgccgagcgcatcaccgagacgctcgcgtccgaggatgttgctgcgttccgc
gacctcatcgcctcctacgaggaagagcacaacgttccggcttcggagatcgcagccgcc
ctggccgtcatggcgcagggaggacagcccttgctggtcaaggaactgcccgcagctccg
gagtaccagaagcgcgagcgctccaaggacggcttcggttcccgtggcccgacccgtgcg
ctcaccgagggcaacgcaacctaccggatcgccgtcggacgccgccagcgcgtcatgccg
ggctccatcgtgggtgccattgccaacgaaggcggcatttcctccgcacagatcggtggc
atcgacatccgctcggaccactccctggtggagctcccggcagacctgagccccgagcag
ttgcgcgcactgtcccgcacccgcatcggtggcgagctgatccaccttgagctggataac
ggccgcaggcccaacagcgagcgtggcggctactccggtggcggacgcggcggctacggc
gaccgtgaaaaccgcggaggcggcaacttcaagggcaacggcggattcaagaaggaattc
cgcaagtccgacggcgagcgttcctccgctgaccgtggcggccgctcctacagcgaccgc
accgagcgcacggcaggcagctacggcgaccgcgaccgcggccaggccagcggctcacgc
ttcggtggtcacggtgacggtgcccgcaagccccgcacgggtggcgaaggcagcaaccgc
gacttcaaccgcaagggcaagtggtaa
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