KEGG   Paenarthrobacter sp. YJN-D: HMI60_18145
Entry
HMI60_18145       CDS       T10599                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
payn  Paenarthrobacter sp. YJN-D
Brite
KEGG Orthology (KO) [BR:payn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:payn03032]
    HMI60_18145
   03036 Chromosome and associated proteins [BR:payn03036]
    HMI60_18145
   03400 DNA repair and recombination proteins [BR:payn03400]
    HMI60_18145
DNA replication proteins [BR:payn03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HMI60_18145
Chromosome and associated proteins [BR:payn03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HMI60_18145
DNA repair and recombination proteins [BR:payn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HMI60_18145
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QOT23299
LinkDB
Position
complement(3911313..3911600)
AA seq 95 aa
MAKNRSELVAEVAGKAGTSQAAVNSVLDALFEVFETSVAAGEKITIPGWLAVERTDRAAR
TGRNPQTGETIQIAAGHSVKLTAGSKLKAAVAKKK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctaagaaccgtagtgaactcgttgcagaggtagcaggcaaggctggcaccagccag
gcagcagtcaactccgtgctcgatgcactgttcgaagttttcgagacttctgtcgccgcc
ggcgagaagatcaccatcccgggctggctcgccgttgagcgcaccgaccgtgcagctcgc
accggccgcaacccgcagaccggcgaaaccatccagatcgcagccggccacagcgtcaag
ctgaccgctggctccaagctgaaggcagctgtcgccaagaagaagtaa

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