Paenarthrobacter sp. YJN-D: HMI60_19240
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Entry
HMI60_19240 CDS
T10599
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
payn Paenarthrobacter sp. YJN-D
Pathway
payn00260
Glycine, serine and threonine metabolism
payn00460
Cyanoamino acid metabolism
payn00630
Glyoxylate and dicarboxylate metabolism
payn00670
One carbon pool by folate
payn00680
Methane metabolism
payn01100
Metabolic pathways
payn01110
Biosynthesis of secondary metabolites
payn01120
Microbial metabolism in diverse environments
payn01200
Carbon metabolism
payn01230
Biosynthesis of amino acids
payn01240
Biosynthesis of cofactors
payn04981
Folate transport and metabolism
Module
payn_M00140
C1-unit interconversion, prokaryotes
payn_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
payn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HMI60_19240
09102 Energy metabolism
00680 Methane metabolism
HMI60_19240
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HMI60_19240
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HMI60_19240
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HMI60_19240
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HMI60_19240
Enzymes [BR:
payn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HMI60_19240
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QOT23493
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Position
complement(4130373..4131692)
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AA seq
439 aa
AA seq
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MNPAAVTEFEQVVSASLDAQLSELDPEIAAKIDDELGRQRDGLEMIASENHTAVAVMQAQ
GSVLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRIKALFGAEYANVQPHSGAQANASVMH
ALIKPGDTIMGLNLAHGGHLTHGMRINFSGKLYNVVPYGVREDTHTVDMAEVERLAQEHK
PALIMAGWSAYARQLDFAEFRRIADSVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVTTST
THKTLAGPRGGIILSNDADIAKKINSAVFPGQQGGPLEHVIAGKAVAFKIAASEEFRERQ
ERVLAGSRILAERLVQPDVAAKGISVVSGGTDVHLVLVDLRNCELDGQQAEDRLAAIDIT
VNRNAVPFDPRPPMVTSGLRIGTPALATRGFGEAAFREVADIIAVALIADADADLTGLRH
RVEALAAAHPLYPGVANLG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggcagccgtgaccgaattcgagcaggttgtgtcggcgtcgttggacgcgcag
ctctccgagctggaccccgagatcgccgcgaagatcgacgacgaactgggccgccagcgc
gacggcctggaaatgatcgcatcggagaaccacactgcggtggctgtcatgcaggcgcag
ggctcagtgctgaccaacaagtacgccgagggctacccgggcaagcgctactacggcggc
tgcgaacacgtcgacgtcattgagcagctggccattgaccgcatcaaggcattgttcgga
gccgagtacgcgaacgtgcagccgcactccggtgcacaggcgaacgcctcggtgatgcac
gcgctgatcaagccgggcgacaccatcatgggcctgaaccttgcccacggtggccacctc
acgcacggcatgcggatcaacttctctggcaagctctacaacgtggtcccgtacggggtt
cgcgaggacacccacactgtggacatggctgaggtggagcgcctggcccaggagcacaaa
ccggcactgatcatggccggctggtccgcgtatgcgcggcagctggacttcgctgagttc
cgccggatcgctgactccgtgggcgcctacctgatggtggacatggcccacttcgccggc
ctggtggctgccggcctgcacccttcgccggtcccgcacgcccacgtcaccacctccacc
acgcacaagaccctcgccggtccgcgcggcggaatcatcctgtccaacgacgccgacatc
gccaagaagatcaactcggccgtgttcccgggccagcagggcggaccgctggagcacgtg
atcgcgggcaaggctgtcgcgttcaagattgccgcttcggaggagttccgtgagcgccag
gaacgcgtcctggcaggctcgcgcatcctggccgaacgcctggtccagcccgacgtcgct
gccaagggaatctccgtggtttccggtggaacagacgtgcacctggtcctcgtggatctg
cgcaactgcgaactcgatggccagcaggccgaggaccgtctcgccgcgatcgacatcacc
gtcaaccgcaacgccgtcccgttcgacccgcgcccgcccatggtcacctctggcctgcgg
atcggcacccctgcgctggcaacgcgcggtttcggggaagcggccttccgtgaggtcgct
gacatcatcgccgtggcactgatcgccgacgccgatgcggaccttaccgggttgcgtcac
cgcgttgaggcactcgctgccgcgcacccgctgtacccgggagttgcgaacctcgggtag
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