Paenarthrobacter sp. YJN-D: HMI60_20905
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Entry
HMI60_20905 CDS
T10599
Name
(GenBank) relaxase domain-containing protein
Organism
payn Paenarthrobacter sp. YJN-D
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
AAA_22
AAA_11
TraI_hel_assoc_N
UvrD_C_2
AAA_5
NACHT
AAA_33
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QOT24105
LinkDB
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Position
pYJND-3:2612..6133
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AA seq
1173 aa
AA seq
DB search
MRVMSSGRGYDYLLKSVVRGDGDMGGTTALTRYYTQEGTPPGRWIGSGLHALGNGAIKRG
DEVMPEQLALLLGTGRDPVTGEPLGRAFPEYDGVRARVAARVSKLPGDLSDEQRLEAAAS
IAHEEVETGTRRAVAGFDFTFSVPKSVSVLWGVADTGTQACIREAHHQALGETVAFLERE
VATTRRGVDAGDGAVAQADIVGIVATAYDHWDSRLGDPQLHTHVVISNKVKTAEDGRWRS
LDGRPLHAAVVAMSAHYNAVLADRMTRTFGIEWEQRDRGNNHNTAWELEPVPESLIREFS
SRSRMIDQETNRLIEEYVARHGRRPSTTRIIELRAKATLTTRPEKVIRSLFDLTTEWRER
VQTILGAEAVDWARRSTAGPVARPTLRADDISLHVVAQVGVSVVGAVSEKRSTWRHWNLW
AEASRQTMGWRFASVKDREAVVGLVVDAAKQESLSLTPPELATSPEVFRREDGSTVFRPR
HSVVFTSEELLAAEDRLLAHSTDLTAPSVGLHVVERVGRKQHLLSAEQVDTLARIAVSGR
QIDCLVGPAGAGKTTAMHALKTAWTTVHGKDSVVGLAPSAIAAQVLAEDLGIRCENTAKW
LHDYDRGRAQVRKGHLVIIDEATLAGTLALDRLVALTAEAGAKVLLVGDWAQLQSVEAGG
AFTLLASARPDTPELTEVHRFTNEWEKAASLDLRLGRTEVIGTYVQHDRVREGTTDAMMD
AAYLAWSDDIRAGRTAILVADATETVKDLNTRARADRIAGGDPAGSTEANLGDGTRASMG
DLVITRSNDRRLSTVYGGWVHNGDRWRVTNVGGDGSMTVLRLGAVSGSTVTLPAAYVAKH
VDLGYAVTAHRAQGLTVDTSHVVVSCTATRESLYVSMTRGREANIAYVALDKPDEGHAPP
EPEEVNARTVLYGVLKHSGAEPSAHRMIVEEQEQWSSIAQLAAEYETIAAVAQRDRWISL
VKACGLTDEQIDSVTGSDSFGPLTAELRRAEANGHDVDRLLPALVARRSLEDADDAGAVL
ISRLKKAARPKRGRRRAEPSHIAGLIPVAEGPMCPEMMTALTERQSLMESRAKALTANAV
EAKEPWLKRLGTPPTTDAARSRWLNEVSAVAAFRDRYRVDGRRALGAPRTAAQKLDAVRA
RKAIRRARAIADQKDALSNEGRRSMDLYRQPIV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgtcgtcgggcaggggctatgactacctgctcaagagcgtggtccgcggg
gatggcgacatgggcggaacgaccgcgctcacgaggtactacacccaggagggcacgcca
cccggccgatggatcggctcggggctccacgcactcggcaacggtgcgatcaaacgaggg
gatgaggtgatgccagagcagctcgcactgctgctcggcacaggtcgggatccggtgacc
ggcgaaccgctggggcgggcgtttccggaatacgacggggtgagggctcgggtcgcggct
cgggtatccaagttgcctggcgacctcagcgacgaacagcggctcgaggcggcggcctcg
atcgcgcacgaggaggtggagaccggcactcgacgtgccgtcgcgggcttcgacttcaca
ttcagcgttcccaagtcggtctcagtactctggggcgtcgcggacacgggaacccaggca
tgtatccgcgaggctcaccaccaggcgctcggcgaaacggtcgccttcctggagcgcgag
gtcgccacgacccgtcgcggtgtcgatgctggcgacggcgccgtggcgcaagctgacatc
gtcgggatcgtcgcaacggcgtacgaccattgggactcccggctcggtgacccgcagctc
cacacgcacgtcgtcatctccaacaaggtcaagaccgcggaggacgggcgctggcgcagc
ctggacggacgaccgctccatgcagctgtcgtcgccatgtctgcgcactacaacgcggta
ctcgctgaccgcatgacccgcaccttcggtatcgagtgggagcagcgcgacagaggcaac
aaccacaacacggcgtgggagctggagcccgtcccggaatcgctcatccgggagttttcc
agtcgctcccgaatgatcgatcaagagaccaaccgcctgatcgaggagtacgtcgcccgc
cacgggcgccgcccctccacgacacggatcatcgagctgcgagcgaaagcgacgctaacc
acgcgccctgagaaggtcatccggtcgctcttcgacctcacaaccgaatggcgggaacgg
gtccagacgatcctcggggcggaggccgtcgattgggcacgcagaagcacagcgggtccg
gtcgcccgccccacccttcgggccgacgacatctcgctccatgtcgtcgcccaggtaggg
gtctcggttgtcggagcagtgagtgagaagcgttcgacgtggcggcactggaatctctgg
gccgaggcatcgcggcagacgatggggtggcgcttcgcgagtgtgaaggaccgcgaggcc
gtggtcggcttggtcgtcgatgctgcgaaacaggagtcgctgtctctgactccgcccgag
ctggccaccagccccgaggtcttccggcgagaggacggcagcacggtgtttcggccacgg
cactcggtggtctttacgtctgaggagttgctcgccgccgaggaccggttgctggcccac
tcgaccgacctcaccgccccgtcggtcggcctgcatgtcgtcgagcgcgtgggacgcaag
caacacctgttgagcgctgagcaggtcgacacgctagcgcggattgctgtgtccgggcgg
cagatcgattgtctcgtcggtcctgccggtgcaggcaagaccaccgccatgcacgccctg
aagacagcttggacgacggtgcacggaaaggacagcgttgtcggcctcgcacctagcgct
atcgcggctcaagtgctcgccgaagacctcggcatccggtgcgagaacaccgccaagtgg
ctccacgactacgaccgcggacgggcgcaggtccggaaggggcacctcgtgatcatcgac
gaagccacgctggccggcaccttggctctcgaccgactggtcgccctcacagccgaagcc
ggcgcgaaggtgctgttggttggggactgggcgcaactccagtcagtcgaggcaggaggc
gcgttcacactcctggcctccgcccgccccgacacccccgagctcaccgaggtccaccgc
ttcaccaacgagtgggaaaaagccgcctcgctcgacctgcgcttgggccgcaccgaggtc
atcggcacgtacgtccaacacgaccgggtccgcgagggcacaaccgacgcgatgatggac
gccgcctacctcgcctggagcgatgacatacgggccggtcgcaccgcgatcctcgtggca
gatgcgaccgagacggtgaaggacctcaacacacgagcccgcgccgaccgcatcgccggg
ggcgatccagcaggaagcaccgaggccaatcttggtgacggtacgcgtgcgtcaatgggt
gatcttgtcatcacccgcagcaacgaccgtcgtctctcgaccgtgtatggcggatgggtc
cacaacggagaccgctggcgcgtcacaaatgtgggcggtgacggctcgatgaccgttctg
cgtctcggcgcggtctcgggctcaaccgtgaccctgccagcggcgtacgtcgccaagcac
gtcgacctagggtacgccgtgacggcccaccgcgcccagggcctcaccgtcgacacctcg
cacgtcgtcgtctcatgcacggccacccgcgagagcctgtacgtctccatgacacggggc
agggaggcgaacatcgcgtacgtcgctctggacaagcccgatgagggccacgccccgcca
gagcctgaggaggtcaacgcacgcaccgtgttgtacggcgtgctcaaacactccggggcg
gaaccgtccgcccaccggatgatcgttgaggagcaggaacagtggtcatccatcgcgcaa
ctcgcggcggagtacgagaccatcgctgccgttgcccagcgggaccgctggatcagcctg
gtaaaggcctgcgggttgaccgacgagcagatcgactcggtgaccggatccgactcgttc
ggtccgctcactgccgagctgcgacgtgccgaagcgaatggacacgacgtcgaccgactc
ctgccggcgctcgtcgcacgccgatcgctcgaagatgctgacgacgcgggagccgtgctg
atcagccgactcaagaaggcagcgcggcccaaacgtgggaggcgtcgcgcagaacctagc
cacatcgccgggttgatccccgtggccgagggcccgatgtgtcccgagatgatgaccgca
ctcaccgagcgacagtcacttatggagtcgcgggcgaaggcattgaccgccaacgcggta
gaggccaaggagccctggctcaaacgcctgggcacgccacctacaacggacgcagcccgt
agccgctggctcaacgaggtcagcgctgtggctgccttccgcgaccgataccgagtggac
gggcgacgcgctctcggagcgccgcgaaccgccgcgcagaaactcgacgccgtccgggca
cgaaaggcgatacgccgagctcgggcaatagccgatcagaaggatgcactttctaacgag
ggcagaagaagcatggacctgtaccgacaacccatcgtctga
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