Cutibacterium acnes TypeIA2 P.acn33: TIA2EST2_05040
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Entry
TIA2EST2_05040 CDS
T01656
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
paz
Cutibacterium acnes TypeIA2 P.acn33
Brite
KEGG Orthology (KO) [BR:
paz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TIA2EST2_05040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paz03021
]
TIA2EST2_05040
Transcription machinery [BR:
paz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TIA2EST2_05040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2917
Motif
Other DBs
NCBI-ProteinID:
AEW79097
LinkDB
All DBs
Position
1089053..1090573
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AA seq
506 aa
AA seq
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MSTTTSSTANTAADEEAKIATARKSTRSTSAKTGTTGRAKKTTATKASQSSAHKSAGGAK
TPTAKSSGAKTTTKPTSTKTAAKSTKTAASKTTKSSGTKTVGNASSGGAKKSTTKRRTTK
AKKETTVAEAASGEVDVTVERDGDDVVLTIGGKKRSLDDVDERDYDPAEAAKDEQQINKE
TEAFSLSDNDDADEPEQTVMVAGATADPVKDYLKQIGKVALLNAVEEVDLAKRIEAGLFA
GEQLADPDAKIREKDREDYEWIAEDGKVAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQ
EGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKLARV
QRQMLQDLGREPTPEELASELDMTAEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDS
EAIVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRER
IRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccaccacgtccagcactgcaaacaccgctgcagacgaggaggcgaagatagcc
accgcgaggaagagtacacgttccacctctgctaagaccggtacgaccggtcgggcgaag
aagaccactgcgacgaaggcaagccagtcgtcggctcacaagtccgctggtggggccaag
actcccacggctaagtcatctggggccaaaaccacgacgaagcccaccagcactaagacg
gccgcgaagtccaccaagacagcggcgagtaagacgacgaagtcttcgggtacgaagact
gttggaaacgcgtcgtccggtggtgccaaaaagtcgacaactaagaggcggaccactaag
gcgaagaaggaaacgaccgtcgccgaagccgcatccggtgaggtcgatgtgaccgtggag
cgcgacggtgacgacgttgtgctgactattggcggcaagaagcgctccctcgacgatgtt
gacgagcgtgactacgacccggccgaggctgctaaggacgagcagcagatcaacaaggag
accgaggcgttctccttgtctgataacgatgacgctgacgagcccgagcagaccgtcatg
gtcgccggcgctaccgcagatcccgttaaggattaccttaagcagatcggcaaagtagct
ctgctcaatgccgtcgaagaggttgatctcgccaagcgcattgaggccggtctgtttgcc
ggcgagcagctagccgacccggatgccaagatccgggagaaggaccgcgaggattacgag
tggatcgccgaggacggcaaggtggcgaagaaccacctattggaggccaacctccgtctg
gtcgtctccttggctaagcgttacaccggtcgcggcatgctcttccttgacctcattcag
gagggcaacctcggtctcattcgtgccgtcgagaaattcgactacaccaagggctacaaa
ttctctacgtacgcgacgtggtggatcaagcaggccattacccgcgccatggccgaccag
gctcgtactattcgtatccctgtgcatatggtcgaggtcatcaacaagctggctcgcgtc
cagcgtcagatgctccaggacctaggtcgtgagcccaccccggaagagcttgccagcgaa
ctcgatatgaccgcagagaaggtcattgaggtgcagaaatacggtcgcgagccgatctcg
ctgcataccccactgggtgaggatggcgattctgagtttggtgaccttattgaggattct
gaggccatcgtgccagcagacgccgtcaacttcaccctgttgcaggagcagctgcatgat
gtcctcgataccttgtccgagcgagaggccggtgttgtgtcgatgcgattcggcttgacc
gacggacagcccaagaccctggatgagatcggcaaggtctacggtgttactcgggagcgc
atccgccagatcgagtccaagaccatgtcgaaactgcgtcatccgagtcgctctcaggta
ctgcgcgactacctcgactga
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