Pseudomonas azerbaijanorientalis: KSS91_01850
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Entry
KSS91_01850 CDS
T07706
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
paze
Pseudomonas azerbaijanorientalis
Pathway
paze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSS91_01850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paze03019
]
KSS91_01850
03400 DNA repair and recombination proteins [BR:
paze03400
]
KSS91_01850
Enzymes [BR:
paze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS91_01850
Messenger RNA biogenesis [BR:
paze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KSS91_01850
DNA repair and recombination proteins [BR:
paze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSS91_01850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
HAD
AAA_22
Penicillinase_R
Motif
Other DBs
NCBI-ProteinID:
QXH62260
LinkDB
All DBs
Position
412350..414284
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AA seq
644 aa
AA seq
DB search
MHNTLEQVFGYPQFRPGQEAAVSAVLAGRSAAAIFPTGSGKSLCYQLPALLLPHLTLVVS
PLLALMQDQLAFLQRHGISAGSIDSAQSRDDASDVMARAKSGELKILMISVERLKNERFR
HFLQQVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQVLLLTATATPRVIADM
QAKFAIAADDVVTTGFYRPNLNLLVEPVRGADKRRRLVEWMSQRADQPSIVYVTLQKTAE
HIAEHLNRNGIQAEAYHAGLPHEQREAIQRRFMGGQSNCIVATIAFGMGIDKSDIRNVVH
FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPELDGIRCVLDEML
AAAPEGQWEFLLGPLADQSNIRQLPLKTLLVQLELRGLIAPRYAYYAEYRFKYLEEPEAL
LARFEGERRDFVAAIIQTSSRARTWATVSFEALHEQHQAERSRVVKALDYFQEKGWVELE
SKQMTEVYSVLQSGFDSTALSEELHRYFTRHEHTEIARIHAMLDLFATDRCLGHRLAEYF
GDHNAPQQCGHCSVCHGQVVRLPAPPELPALVDKNFEALCGDFIHRHEQHTGNVPSAERV
TRFLCGISVPLFTKLKARTIPGFATLEDYPYAEVRGWAQRHLVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaccctggaacaggttttcggttatccacagtttcgacccggtcaggaggcg
gccgtcagtgccgtgctggccgggcgttcggcggcggcgattttccccaccggttccggc
aaatccctttgctaccaattgccggcgctgttgctgccgcacctgacgctggtggtctcg
ccgttgctggcgttgatgcaggatcaactggcgttcctgcaacgccacggcatctcggcg
ggcagtatcgattcggcccagagccgcgatgacgccagcgatgtcatggctcgggcaaaa
tccggcgaattgaagattctgatgatctcggtggaacgcctgaagaacgaacgcttccgg
cattttctgcagcaagtaccgatctcgctgctggtggtggacgaggcgcattgcatctcc
gaatgggggcacaactttcgcccggactacctcaagcttcccgactatcaacgccagttc
aatatcccccaggtgctgctgctgaccgcaacggcgacgcccagggtcatcgccgacatg
caggcgaaattcgccatcgccgccgacgatgtggtgaccaccggtttttatcgcccgaac
ctcaatttgctggtggagccggttcgtggagcggacaagcgcagacgcctcgtcgagtgg
atgagccagcgtgcggaccagcccagcatcgtctatgtcaccttgcagaaaaccgccgag
cacatcgccgaacacctgaaccgcaacggcattcaggccgaggcctatcacgccgggttg
cctcatgaacaacgggaagcgatccagcgtcgcttcatgggcgggcagtccaattgcatc
gtcgccaccatcgctttcggcatgggcatcgacaaaagcgacatccgcaatgtggtgcat
ttcgacctgcccaaatccatcgaaaactacagccaggaaatcggtcgcgccgggcgtgac
gggcagccgtcggactgcctggtgttggccaaccgcgacagcctcaacgtgctggagaac
ttcgtctacggcgacacccccgagctcgatggcattcgttgcgtgctggacgagatgctt
gccgcagcacccgaggggcagtgggagtttctgctggggccgttggcggatcagagcaat
attcgccaattgccgctcaagaccttgctggtgcaactcgaactgcgcgggttgatcgca
ccgcgttacgcctactacgccgagtatcgtttcaagtatctggaggagcccgaggcactg
ttggcgcgttttgaaggcgagcgcagggattttgtcgctgcgatcatccagacctccagc
cgcgccaggacctgggccacggtgagtttcgaggcgttgcacgagcagcatcaggccgag
cgcagtcgagtagtgaaggcgctggactacttccaggagaagggttgggtggagctcgaa
agcaagcagatgaccgaggtctacagcgtgctgcaaagcgggttcgacagcaccgcgttg
agcgaagagctgcaccgttatttcactcggcatgaacacaccgagatcgcgcggattcac
gcgatgctggatctgttcgccaccgaccgttgtctgggccatcgcctggccgagtatttc
ggcgaccacaatgctccgcagcaatgcggacattgttcggtgtgtcatgggcaagtggtg
cggctaccggcaccaccggagttgccggcgcttgtggataaaaatttcgaggcgttgtgt
ggcgactttatccacaggcacgagcagcacacgggcaacgtgccttcggctgaacgcgtg
acgcggtttctgtgcgggatcagcgtgccgctgttcaccaaactcaaggcacggacgatt
cccggatttgcgacgctggaagattatccgtacgccgaggtacgcgggtgggcccagcgg
catctggtagcctga
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