Pseudomonas azerbaijanorientalis: KSS91_03960
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Entry
KSS91_03960 CDS
T07706
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
paze
Pseudomonas azerbaijanorientalis
Pathway
paze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS91_03960 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paze03400
]
KSS91_03960 (recC)
Enzymes [BR:
paze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSS91_03960 (recC)
DNA repair and recombination proteins [BR:
paze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS91_03960 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RIH_assoc
Motif
Other DBs
NCBI-ProteinID:
QXH62659
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All DBs
Position
904482..907931
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AA seq
1149 aa
AA seq
DB search
MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DAEEDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPAKSLLDKAPLTWRLMRLLPQL
INQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAEGRHQTRSARGE
AKALTPANCWQAELWRALLLDVGEQGMAQSRAGVHQRFVERINNLETAPQGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKSGMPVVI
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRSAFRDGRIDLFSDGQPLNVLNQL
QDDILELRPLNETRERWPAIDLQTDESIRFHIAHSAQREVEILHDQLLARFSADPALRPR
DIIVMVPDIDSYAPHIRAVFGQLDRQDPRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVEERDLPTLHRWIEGAGIRWGMNAEQRAGLGLPNELEQNS
WRFGLRRMLLGYAVGSADAYEGIEPYDEIGGLDAALIGPLVALLDALEVAHHELSQPAPP
RQWGLRLQALVQLFFLASNEHDDYLLAQLEELRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRLAQ
SGEDLLEAMTREHPLQPFSARYFHEGDESFSYATEWQVLHQAAEQQASAEVLEAHVQDEP
LSLGQLQDFLRNPVRHFFSQRLKVFFEAAEVPLGDEEPFVLDALQRYSLSDRLLEAALAD
PGNTGQALEDQAKRLQNSGLLPMAGFGECLQRELIEPLPDLLQRHQQLLALWPTPLSSAL
PVNLELQGLHVEGWLSGLHQRADGGLLSVTTIPNSIGSIKSRKWHRLTRPWLTHLVACAS
GMTLTTALVASDDSLLLAPMDESTARKILGDLLMAWQSGMRQPLPIAVKTAFAWLGQTDP
VKATAVARKAYEGDGQTTDGERRESPALARQFADYDALSADETFPDWCDALYRPLLEAPW
RSLSSEESR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgacgtccctcagtgctggattcatggtggttcacggcaatcgcctggac
gagttgcgcagcctggtggtcagctggatgcggcgctacccgctggctcccctggagaat
gaaatcgcgttggtgcaaagcaatggcattgcccaatggctgaagctggcactggcggaa
gatgccgaagaagacgacatgggcggctgtggtatcgccgcggccatcgacgtgcagttg
cccggcagtttcatgtggcagctctatcgcatggtccttgggcgcgatgaaattccggcc
aagtccctgctcgataaagctccgctgacctggcgattgatgcgcctgctgccgcagttg
atcaaccagccacacttcgagccgctgcagcgcttcctgacccatgacaccgatctgcgc
aaacgctatcaattggctgagcgtctggcggacctgttcgaccagtaccaggtctatcgg
gctgactggcttgaagactgggcagaaggtcgacatcagacaagaagcgccaggggcgag
gccaaagccctgacgccggccaattgctggcaggcagagttatggcgtgcactcttgctg
gatgtcggagagcaaggcatggcgcaaagccgtgccggggttcatcagcgattcgtcgag
cgcatcaacaacctcgaaacagctccccagggattgccctcgcgagtgatcgttttcggg
atttcttcgctgcctgcccaagccctggaagcactggcggggctggcacgattcagtcag
gtcctgctgtgcgtacataacccgtgtcgtcaccattgggcggacatcgtcgccgataaa
gacctgttgcggcatcaatacaagcgacaggcccgcaagagcggcatgccggtagtgatc
gatccgcaaaccctgcaccagcatgctcacccgctgctggctgcctggggtaaacagggg
cgggactatatcaacctgctcgacagttacgacgatcccaacagctatcgctccgcattt
cgtgacgggcgcatcgacctgttcagtgacggtcagccgctgaatgtgctcaaccagttg
caggatgacatcctcgagttgcgtcccctcaacgagactcgggagcgctggccggccatc
gatctgcagacggacgaatcgatccgttttcacattgcccacagcgcccagcgagaagtc
gagattctccacgatcaactgctcgcgcgcttcagtgccgatccggcattgcgcccccgg
gacatcatcgtcatggtcccggacatcgacagctacgccccgcacattcgtgccgtgttt
ggccagctcgaccgtcaggacccgcgcttcattccgtttacgctggctgaccagggccag
cgtggtcgcgatccactgctgattgctgtggagcacctgctcaagctgcctgacagccga
ttccccgtcagtgagattctcgatctgctggacgtcccggcactgcgcgcccgctttggt
gtcgaggagcgtgacctgccgaccctgcaccgctggatcgaaggtgccggcattcgctgg
ggcatgaatgccgagcaacgtgccggactcgggctgcccaatgaactggagcaaaacagc
tggcgtttcggcttgcgacggatgttgctcggttatgccgttggcagcgccgatgcctat
gagggtatcgagccctacgacgagatcggtggtctggacgctgcgctcattggtccgctg
gttgcgctgctggacgcgctggaagtggctcaccatgaactctctcagcctgcaccgccg
cggcaatggggcttgcgcttgcaggcgttggtgcagttgttcttcctcgccagcaacgaa
cacgatgactacttgctggctcagctcgaagaactgcgtgagacctggctcgagacctgc
gaatccgtcggcttgcaggacgagttgccgctgacggtcgtccgtgaagcctggcttgca
ggcctggaccagggccgtttgtcccaacgctttctggccggtgcggtgaacttctgcacc
ttgatgcccatgcgtgctatcccgttcaagctggtctgcctgctgggcatgaatgacggc
gattatccgcgtgctcaaccgccgctggatttcgatctgatgggcagtgattaccggcca
ggtgatcgctcccgacgcgaagatgaccgttacctgctactggaggccttgttgtcggct
cgcgatcagctctacatcagttgggtgggccgcagcatccgcgacaatagcgagaggccg
gcgtcggtattgatcggccagttgcgtgaccacctggccagcggttggcgattggcacaa
agtggcgaggatctgcttgaagccatgacccgggaacaccccttgcagcctttcagcgcc
cgctactttcacgaaggggatgagtcgttcagctacgccaccgaatggcaggtccttcat
caagcggcagagcaacaggcgagcgccgaagtgcttgaggctcacgttcaggacgaaccc
ctcagcctcggtcagctgcaggatttcctgcgcaatccggtacggcactttttcagccag
cgactgaaagtcttcttcgaggcggctgaagtgccgttgggcgatgaagagccttttgtc
ctggatgcactgcagcgttacagcctcagcgatcgtttgctcgaagcggcgctggcagat
ccgggaaataccggacaggcactagaggatcaggccaaacgcctgcaaaacagcgggctg
ctgcccatggccggtttcggtgagtgcctgcaacgtgaattgatcgaaccattgcccgac
ttgctgcaacgccaccaacagctcctggctttgtggccgacaccgctcagcagtgcgttg
cccgtcaatcttgaactgcaaggcctgcacgtcgagggctggctcagcggtctgcatcag
cgcgctgatggtggtttgctgtctgtcacgacgatccccaacagtatcggctcgatcaaa
tcgcgcaaatggcatcgactgacgcgcccgtggctcacgcatctggtggcctgtgccagt
ggcatgacgttgaccactgcactggtggccagcgacgacagcctgttgctcgcaccgatg
gacgagtccacggcacggaaaattctcggtgacctgttgatggcctggcagtcgggtatg
cgccagcctctgccgatcgcggtcaagaccgcctttgcgtggctggggcaaaccgacccg
gtcaaagccacggccgttgcgcgcaaggcctatgaaggggacgggcagacgacggacgga
gagcgacgcgaaagtccggcacttgcacgccagttcgccgattacgatgccctgagcgcc
gatgaaaccttccccgactggtgtgatgcgctctatcgcccgctgcttgaagcaccctgg
cgttcactgtccagcgaggagtcgcgttga
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