Pseudomonas azerbaijanorientalis: KSS91_04730
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Entry
KSS91_04730 CDS
T07706
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
paze
Pseudomonas azerbaijanorientalis
Pathway
paze02020
Two-component system
paze02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS91_04730
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KSS91_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paze03021
]
KSS91_04730
Transcription machinery [BR:
paze03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSS91_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF4741
RRP4_S1
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
QXH62799
LinkDB
All DBs
Position
complement(1093818..1095311)
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AA seq
497 aa
AA seq
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MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNSD
PLADNAEQKPNTDIQEPSYQESAPTVDNLDEGDWNERIPNELPVDTAWEDVYQTSASSLP
SNDDDEWDFTTRTSAGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEEI
LEAFDPELDIELDEIEAVLHRIQQFEPAGIGARNLGECLLLQLRQLPAKTPWLAEAKRLV
TDYIDLLGSRDYSQLMRRMKLKEDELRQVIELVQSLNPRPGSQIESTEAEYVVPDVIVRK
DNERWLVELNQESVPRLRVNAQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELK
YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLM
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctagtcttgagaatgggccagcagctgacgatgacacctcagctgcaa
caggccatccgcctgctccaattgtcgaccctggacctgcaacaggaaatccaggaggcc
ctggagtccaatccgatgctcgaacgccaggaagaaggcgacgacttcgacaattccgac
cccttggccgacaacgccgaacaaaagcccaacaccgatatccaggaaccctcctaccag
gaaagcgccccgacggttgacaacctcgatgagggtgactggaacgagcgtatccccaat
gaactccccgtcgacaccgcatgggaagacgtttaccagaccagcgccagcagcctgccc
agcaatgacgatgacgagtgggacttcaccacccgcacctcggccggtgaaagcctgcaa
agccacttgctgtggcaactgaacctggctccgatgtccgacaccgatcgcctgatcgcg
gtgaccctgatcgactgtatcaacaatcagggctacctggacgaaaccctcgaggaaatc
ctcgaagccttcgacccggaactggacatcgaactggacgaaatcgaagccgtcctgcac
cgcatccagcaattcgagccggccggcatcggcgcacgcaatctgggcgaatgcctgctg
ctgcaattgcgccagttgcccgccaagaccccttggctggccgaagccaagcgccttgtc
accgattacatcgacctgcttggcagccgcgactacagccagctcatgcgtcgcatgaag
ctcaaggaagatgagctgcgccaggtcatagagctggtccagagcctcaacccgcgcccg
ggttcgcaaatcgagtccaccgaagccgagtacgtcgttcctgacgtcatcgtacgcaag
gacaacgagcgctggctggtagagctgaatcaggagtcggtgccacggctgcgggtcaac
gcccagtacgccggttttgtgcgccgcgccgataccagcgccgacaacacattcatgcgc
aatcagttgcaggaggcccgctggttcatcaagagcctgcagagccgcaatgaaaccctg
atgaaggttgccacccagatcgtggagcatcagcgcgggttcctcgaatatggcgacgaa
gccatgaagccgctggtcctgcatgacatcgccgaagcggtcggcatgcatgagtcgacg
atttcgcgggtaacgacccagaagttcatgcacaccccccggggcatttatgaactgaaa
tactttttttccagtcacgtaagcacctccgaaggcggcgaatgctcgtccacggcgatc
cgggcgatcatcaaaaaactggttgccgcggaaaatcagaaaaagccgttgagtgacagc
aagatcgctggtttactggaggcacaaggcattcaggtggctcgccgcaccgtcgccaag
taccgcgaatccctcgggatcgcgccttcgagcgaacgcaagcggttgatgtag
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