Pseudomonas azerbaijanorientalis: KSS91_06380
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Entry
KSS91_06380 CDS
T07706
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paze
Pseudomonas azerbaijanorientalis
Pathway
paze03030
DNA replication
paze03430
Mismatch repair
paze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS91_06380 (dnaE)
03430 Mismatch repair
KSS91_06380 (dnaE)
03440 Homologous recombination
KSS91_06380 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paze03032
]
KSS91_06380 (dnaE)
03400 DNA repair and recombination proteins [BR:
paze03400
]
KSS91_06380 (dnaE)
Enzymes [BR:
paze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS91_06380 (dnaE)
DNA replication proteins [BR:
paze03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS91_06380 (dnaE)
DNA repair and recombination proteins [BR:
paze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS91_06380 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXH63112
LinkDB
All DBs
Position
1468768..1472289
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDNPLSRISLLVMNAEGYRNLTELISRGFIEGQRNGAIIIEREWV
AEASAGLIMLSAAKEGEIGQAMLSGNHAEAETLAREWMDVFPDRFYLEIQRTNRPNDEEQ
LHGAVALAEKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDIPEALENTVEIAKRCNIEVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYT
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARLAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLTAMEEAIKAAEQTARTQDSGHSDLFGGLFVEEDADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFSEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLKLR
VKRVMSMEDARTNLAESLRLKLHAKDLKGDQLRWLGELLKRHRGACPITMDYTSPDAKAL
LQFGEGWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctacgcctgcacactgaatactccctggtcgacggtctg
gtgcggatcaagccgctggtcaagaccctggtcggcatgaacatgcctgccgtggcggtc
accgaccagaacaacatgtgttccctggtcaaattctataaaaacgccatgggtgccggg
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaggatccggacaacccgctg
agccggatcagcctgctggtgatgaacgctgaaggctatcgcaacctcaccgaactgatt
tcccgcggctttatcgaaggtcagcgcaatggcgcaatcatcatcgagcgcgaatgggtc
gctgaagccagcgccggcttgatcatgttgtcggcggccaaagagggcgagatcggccag
gccatgctcagcggcaaccacgcggaggccgaaaccctggcccgcgaatggatggacgtt
tttccggatcgtttctacctggagatccagcgcaccaatcgccccaacgatgaagaacaa
ctgcacggcgccgtggccctggccgagaagctcggtgcgccgctggtggcgaccaacgac
gtgcgtttcatcaagcaggaagacttcgccgcccacgaaacccgcgtctgcatcggtgag
ggccgtgccctcgacgatccgcggcgttcgaagaattacagcgatcagcagtacctcaaa
agcgccgaggaaatggccgagctgttcagcgacattcccgaggcgctggaaaacaccgtc
gagatcgccaagcgttgcaacatcgaagtgaagctgggtacgcacttcctgcccaacttc
ccgatccccgatggcatgaccatcgacgagtacttccgcaaggtgtccttcgatggcctg
gaagagcgccttgccgtcctgctgcccaaggacaccaccgaagactatgaagccaagcgt
caggtctatgtcgaccggctgaatttcgagctggatatcattatccagatgggcttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggcgtaccggta
ggtcctggccgtgggtcgggtgccggatcgctggtggcctatgtacagaagatcaccgac
ctcgacccgctggaatatgacctgctgttcgagcgtttcctcaatccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggacggtcgcgatcgggtgatcgactacgtg
gccgagaaatacggccgcaacgcggtaagccagatcatcacttttggttccatggccgcc
aaggctgtggtccgcgacgtggcgcgggtgcagggcaagtcctatggcctggcggaccgt
ctgtcgaagatgatcccgtttgaagtcggcatgaccctggaaaaggcctacgaacaggaa
gagatcctgcgcgacttcatcaaggtcgatgaagaagccgcggaaatctgggagatggcc
cgcaagctcgaaggcgttgtgcgtaacgtcggcaagcacgccggtggtgtggtgatcgcc
ccgaccaaactgaccgacttctcgccgatctactgcgacgaagcgggcgatggcctggta
acccagttcgacaaggacgacgttgaagcggccggcctggtgaagttcgacttcctcggt
ttgcggaccctgacgatcatcgattgggcgctgaaaaccatcaaccgcgaccgcgccaag
gtcaacgagccgccgctggatatcgcgttcattccgctggacgacaaaccgacctacacc
ttgctgcaaaaagccgaaaccacggcggtgttccagcttgaatcccggggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgtccgggtccgctgcaatcgggcatggtggacgacttcatcaaccgcaagcacggtcgc
gccgagctggcgtatccgcactcggactaccagtacgaaggcctcaagcccgtactggca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcc
ggttacaccctcggtggtgcggacatgctgcgtcgcgccatgggtaagaaaaaacccgag
gaaatggccaagcagcgcggcggtttcattgaaggttgcgccaccaacaatatcgacgcg
gacctggccggtaacattttcgacctggtggaaaagttcgccggttacggcttcaacaag
tcccactccgccgcctatggcctggtgtcgtaccagaccgcgtggctgaaggcgcactac
ccggcgccgttcatggccgcggtactctcggcggacatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcggaccatgaagttgcgtctcgacgcaccggacgtaaatacc
tccgaattcaagttcacggtgaacgacgaaggccggatcatctacggcctgggggccatc
aagggcgtgggtgaggggccggtcgaggcgatcaccgaagcgcgtctggcgggcccgttc
aaggatctgttcgatttctgtgcccgggtcgacctcaagcgcatcaacaagcgcaccctc
gatggtttgatccgcagcggtgccctggatcgcctcgggccgtacttccacgatgagcag
aaagcctaccaggccaacatcgaccgcaatcgcgcggtgttgctgacggccatggaagaa
gcgataaaggcggccgaacagaccgcgcggacccaggacagcggtcactccgacctgttc
ggcggtctgtttgtcgaagaagacgccgacgtctacgccaatcaccgcaaggccaaggaa
ctgaccctcaaggagcgtctcaaaggcgagaaagataccctcggcctgtatctgaccggt
cacccgattgacgaatatgaaggtgaaatccgtcgctttgcccgccagcgcatcatcgat
ctgaaacctgcgcgtgatacccagaccgttgccgggatgatcatcgccttgcgggtgatg
aagaacaaaaagggcgacaagatggggttcatcaccctcgacgaccgttccggacggatc
gaggcctcgctgttttccgaggcgttccattcggcgcaatcattgttgcagaccgacgcg
atggtggtggtcgaaggcgaggtcagcaacgacgacttctccggaggcctgaaattgcgg
gtcaagcgggtgatgagcatggaagatgcgcgcaccaacctggccgaaagcctgcgcctg
aagttgcatgccaaggatctcaagggcgatcagctacgctggttgggcgaactgttgaag
cgtcaccgcggtgcatgtccgatcaccatggactacaccagccctgatgcgaaggccttg
ttgcagttcggcgagggctggcggatcgatccggcggatgcgttgattcaagccctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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