Pseudomonas azerbaijanorientalis: KSS91_06850
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Entry
KSS91_06850 CDS
T07706
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
paze
Pseudomonas azerbaijanorientalis
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paze03021
]
KSS91_06850 (rapA)
Transcription machinery [BR:
paze03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KSS91_06850 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXH63201
LinkDB
All DBs
Position
complement(1567528..1570374)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKLTVREVDDIDGLLVYHGLNGQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLPWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEDQVSPEYSLVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESENYRPVAEAVQELLDQ
GRLSPQAHKTIHGFLGNEGEALLAAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGDHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGEWQALIDEARTERERLE
AELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTNGNDLSARVSF
ETLNDQLESVPRASANKFIQAQRDQLAPRINAGEAKILPRHTERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRKQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctacccggccactggc
gacacccgccagtacgcgctacggaatgcgcctctgacccgcgtgcggttttcgccgggt
gactccatcactcacttcgaaggctggaagctgactgtccgcgaagtcgatgacattgat
ggcctgctggtttaccacggcctcaacgggcagaacgaagtggtcaccctgccggaaacc
caactgtcgaacttcatccagttccgcctggccagcgaccgtctgttcgccggccagatc
gacccgctgccgtggttctccctgcgttatcacactctggaacacaccagccgtcagttg
cagtcctccctgtggggcctgggcggcgtgcgtgcgcaaccgatcgcgcaccagttgcac
attgcccgcgaggtcgccgaccgtatcgcgccgcgggttctgctggccgacgaagtgggc
ctgggtaaaaccatcgaagccggcctggtgatccatcgccagttgctctcgggccgcgcc
agccgtgtgctgatcctggttccggagaacctgcagcaccagtggctggtcgagatgcgt
cggcgtttcaacctgcaggtcgcgctgttcgacgaagagcgcttcatcgaaagcgatgcc
agcaacccgttcgaagacacccaactcgcgctggtcgcgcttgagtggctggtggacgac
gagaaagcccaggacgcgctgttcgcggcaggctgggacttgctggtggtcgacgaggcg
caccacctggtgtggcacgaagatcaggtcagccctgaatactcgctggtcgagcaactc
gccgaaaccattcctggcgtactgctgttgaccgccaccccggaacaactgggccaggac
agccacttcgcccgtctgcgcctgctcgacccgaaccgtttccatgacctgcaagccttc
cgcgccgagagcgaaaactatcgcccggtggccgaagccgttcaggagttgctggatcag
ggacgcctatccccgcaagcccacaagaccatccacggtttcctcggcaacgaaggcgaa
gccctgctggccgccgtcaacgatggcgacacagaagccagcgcgcgcctggtgcgcgaa
ttgctcgaccgtcacggcaccggccgcgtactgttccgcaacacccgcgccgccgtgcaa
ggcttcccggaacgcaagctgcatccgtacccgctgccgtgcccggacgaatacctcgaa
ctgccgctgggcgatcacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagagcgctggtggaaattcgacccgcgcgtcgagtggctgatcgaccag
ttgaagatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtacgttccggcatcccggccacggtgttccatgaaggc
atgaacatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagagtttggcgcg
caagtgctgatctgctcggaaatcggcagtgaaggccgcaacttccagttctcccatcac
ctggtgctgttcgacctgccgtcccacccggacctgctggagcaacgcattggtcgtctg
gaccggatcggccagaagcacatcatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctgaacgccttcctcaacacctgcccg
accggcaacgccttgcagcaccagttcggcccgcgcctgctgccgctgctcgaagaagcc
gacgatggcgagtggcaagcactgatcgacgaagcccgtaccgagcgtgagcgcctggaa
gccgaactgcacaccggccgtgaccgcttgctggagctgaactccggtggcgcgggcgaa
ggcgatgcactggtggaagatatccttgagcaggacgaccagttcgcgctgccgatttac
atggaaaccctgtttgacgccttcggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacttacgaccgcaaccaggcgctgtctcgcgaagacatgcaattcattacc
tgggagcacccgatggtgcagggtggcatggatctggtgctgtcaggttccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctgaagccgggcaccgtgttgctggaactg
ttgtatgtcagcgaagtggttgccccgcgctcgctgcaattgggccgctacctgccgccg
gccgccctgcgctgcctgctcgataccaacggcaacgacctgtcggcccgcgtgtcgttc
gaaaccttgaacgatcagctcgaaagcgtgccacgtgccagcgccaacaagttcatccag
gctcagcgtgaccaactggcaccgcggatcaacgccggtgaggcgaagatcctgccgcgc
cacactgaacgtgtcgccgaggcgcagcgtcgcctggccgccgataccgacgaagaactg
gcgcgcctgaccgccttgcaagcggtcaacccgaccgtgcgcgacagcgaactggtggcc
ctgcgcaaacaacgcgagcaaggcctggccatgctcgacaaggctgcgttgcgactggaa
gcgattcgggtgttggtggcgggttaa
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