Pseudomonas azerbaijanorientalis: KSS91_09195
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Entry
KSS91_09195 CDS
T07706
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paze
Pseudomonas azerbaijanorientalis
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paze03032
]
KSS91_09195 (topA)
03400 DNA repair and recombination proteins [BR:
paze03400
]
KSS91_09195 (topA)
Enzymes [BR:
paze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KSS91_09195 (topA)
DNA replication proteins [BR:
paze03032
]
Prokaryotic type
DNA Topoisomerases
KSS91_09195 (topA)
DNA repair and recombination proteins [BR:
paze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KSS91_09195 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QXH63642
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Position
2121740..2124373
Genome browser
AA seq
877 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGNEYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE
APALSPKEKARKQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKGAT
VRFDVAREKGEAFKPLNEAQAMAALEKLKASSYSIVKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSVDAVAMARTYIEGEFGKKYLPETPN
VYSSKEGAQEAHEAIRPSDANTEPSKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV
TVGAGDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDAMKLIKLDPTQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLAES
FSNLMDYGFTAGMEEHLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPENGMRANQPVMT
DIPCTTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKRKLHICGNNPDCDGYEIEEGTYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNATCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA
SGLFLAASQFPKNRETRAPLVMEIIPHKDEIDPKYHFLCEAPKKDPDGLPAVIRYSRKTK
EQYVQTEVDGKPTGWKAFYDGGKWTVEDKRPAKTAKA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtat
ttgggcaacgaatacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggctagcgccagcaaagagccggccgccaagcgcggcaaggctgctgcgggtgaa
gcgccggcactgtcgcctaaagaaaaagcgcgcaagcagctggtcgcgcgcatgggggtc
gatccggatcatggctggaaagccaagtacgagatcctcccgggcaaggaaaaagtcatc
gaagagctgcgccggctcgccaaggatgctgacaccatctatctcgcaaccgacttggac
cgcgagggggaagccattgcctggcacctgcgcgaagccatcggtggtgacgacagccgc
tacaagcgcgtggtgttcaacgaaatcaccaagaaggcgatccaggaagccttctcccag
ccgggcgagctggatatcgaccgcgtcaacgcccagcaggcccgtcgtttcctcgaccgc
gtcgtgggctacatggtttcgccactgctgtgggccaagatcgctcgtggtctgtccgcc
ggtcgcgtgcaatcggttgccgtgaagctggtggttgagcgcgaacgtgaaatccgtgcg
ttcatcccggaagagtactgggaagtgcacgccgacctcggcaccgcaaaaggcgcgacc
gtgcgtttcgatgtggcccgcgaaaaaggcgaagccttcaagccgctcaacgaagcccag
gccatggccgcgctggagaagctcaaggcttccagctacagcatcgtcaagcgcgaagac
aaaccgaccagcagcaagccctcggcgccgttcatcacctccaccctgcagcaggccgcg
agcaaccgcctgggcttcggggtgaagaaaaccatgatgatggcccagcgtctgtacgaa
gccggctacatcacttacatgcgtaccgactcgaccaacctctcggttgatgccgtggcg
atggcgcgtacttatattgaaggcgagttcggcaagaagtacctgccggaaaccccgaac
gtctacagcagcaaggaaggcgcacaagaggctcacgaagcgattcgtccctccgacgcc
aacaccgagccaagcaagctgtcgggcatggagcgtgacgctgagcgcctctacgagctg
atctggcgccagttcctggcttgccagatgctgccggcgcaatacctgtcgacgaccgtc
actgtgggcgccggcgacttcgagctgcgcgccaagggccgcatcctgaagttcgacggt
tacacccgtgtcatgccgcaaatcgccaagccaggcgacgatgatgtgctgccggacatg
gcccagggcgacgcgatgaagctgatcaagcttgatccgacccagcacttcaccaagccg
ccggcgcgttactcggaagccagcctggtaaaagaaatggaaaaacgcggcatcggtcgt
ccttcgacctacgcagcgatcatttcgaccattcaggaccgtggttacgtggcgttgcac
aaccgtcgcttctactcggaaaagatgggcgacatcgtcaccgaacgcctggccgagagc
ttctcgaacctgatggactacggtttcaccgccggcatggaagagcatctcgatgacgtg
gcccagggcgaacgcgactggaaaaacgtgctcgacgagttctacggcgacttcaagaaa
aagctcgaagtagccgaaagcccggaaaacggcatgcgtgccaaccagccggtgatgaca
gacattccgtgcaccacctgcggtcgtccgatgcagatccgcaccgcgtcgaccggcgtg
ttcctcggatgctcgggctacagcctgccgccgaaagagcgctgcaaggccaccgtcaac
ctggtaccgggcgacgaaatcgccgcggacgacgagggtgagtcggagtcgctggtattg
cgtggcaagcatcgctgcccgatctgcagcacggcgatggatgcctacctgctggacgag
aagcgcaagctgcacatctgcggtaacaacccggattgcgatggctacgaaatcgaagag
ggcacctatcgcatcaagggctatgaaggtccgagcctggaatgcgacaagtgcggcagc
gagatgcagctcaagaccggccgtttcggcaagttcttcggctgcaccaacgcgacctgc
aagaacacccgcaaactgctgaagagcggtgatgcggcgccgccgaagatggacccggtg
aagatgcctgagctgaaatgcgaaaaggtcaacgacacctatatcctgcgcgacggtgca
tccggcctgttcctggcggccagccagttcccgaaaaaccgtgagactcgtgctccgctg
gtgatggaaatcatcccgcacaaggatgagatcgatccgaagtatcacttcctctgcgaa
gcgccgaagaaagatcccgatggcctcccggctgtgattcgttacagccgcaagaccaag
gagcagtacgtgcagaccgaagttgacggtaagccgactggctggaaagcgttctacgac
ggcggcaagtggacggttgaagacaagcgcccggcgaagaccgccaaggcttga
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