Pseudomonas azerbaijanorientalis: KSS91_13190
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Entry
KSS91_13190 CDS
T07706
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paze
Pseudomonas azerbaijanorientalis
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paze03032
]
KSS91_13190
03400 DNA repair and recombination proteins [BR:
paze03400
]
KSS91_13190
Enzymes [BR:
paze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KSS91_13190
DNA replication proteins [BR:
paze03032
]
Prokaryotic type
DNA Topoisomerases
KSS91_13190
DNA repair and recombination proteins [BR:
paze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KSS91_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXH64366
LinkDB
All DBs
Position
complement(2966582..2967607)
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AA seq
341 aa
AA seq
DB search
MPDALPPDLHYVDDTQPGITRRKLRGRFAYFNPAGQRITDPEAIKRLNALAVPPAYTQVW
ICADPCGHLQATGRDARGRKQYRYHPRWREVRDADKYLRLREFGLALPKLRQRLEAELAA
PGFSRDKVMATVITLLDTTLIRIGNSQYARDNRSYGLTTLRSRHVEINGSAILFQFRGKS
GVEHQITVKDRRLARIIKRCQDIPGQNLFQYLDENGDRHTVSSSDINSYLQTLTGADFTA
KDYRTWAGSVLALAMLRKLQWEPETEARRHLVEMVKNVARQLGNTPAVCRKCYIHPAVLD
GFVLGDLAQLPRTRARKGLSAEEVGLAIFLERMPAAPEPTN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcactgccacctgacctgcattatgtcgatgacactcagccgggcatcacc
cgcaggaaactgcgcggaagattcgcctatttcaacccggcgggccagcgcatcaccgac
ccggaggcgatcaaacgcctcaacgcactcgcggtgccacccgcctatacccaggtgtgg
atctgcgccgatccatgcgggcacctgcaggccaccggccgagatgcccggggtcgcaaa
caataccgttatcatccgcgctggcgggaggtgcgcgacgccgacaaatacttgcgcctg
cgtgagttcgggctggccttgccgaaactgcgtcagcgactggaagccgaattggcggca
ccgggattcagtcgcgacaaagtcatggccacggtcatcaccctgctggacacgacgttg
atccgtatcggcaacagccaatatgcccgggacaaccgctcctacggcctgacgaccttg
cgcagccgccatgtggagatcaacggcagtgccatcctgttccagttccgcggtaaaagt
ggcgtcgaacaccagatcaccgtgaaagaccgaagactggcgcggatcatcaaacgctgc
caggacattcccgggcagaacctgtttcagtatctggatgaaaacggagaccggcacacc
gtcagttcatccgacatcaacagctatttgcaaaccctcaccggcgccgatttcaccgcc
aaggattaccgcacctgggccggcagcgtcctggctctggcgatgttgcgcaaactgcag
tgggagcctgaaacagaagccaggcggcacctggtggaaatggtcaagaatgttgccagg
cagctcggcaataccccggcggtgtgccgcaaatgctatatccacccggcagtgctggat
ggctttgttctcggtgatctggcgcaactgccaaggaccagggcgcgcaaggggctatcg
gccgaggaggtcgggctggcgatcttccttgagagaatgcccgccgcgcctgaaccgacg
aattga
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