Pseudomonas azerbaijanorientalis: KSS91_17045
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Entry
KSS91_17045 CDS
T07706
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
paze
Pseudomonas azerbaijanorientalis
Pathway
paze02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS91_17045 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paze02044
]
KSS91_17045 (tssC)
Secretion system [BR:
paze02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS91_17045 (tssC)
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXH59836
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Position
complement(3855206..3856744)
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AA seq
512 aa
AA seq
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MSIEHSQAQSRGTTVLPEENQGVYGALFGKINLNPVKVLGEIEVFQSSEALSDVSADERV
TAAVSVFLNLIKQSSRKVRRLDKTLLDEHIASLDAQISRQLDAVMHHPDFQRVESTWRGV
KSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIAQSGLYVHTYTQEYDTPGGEPIAAA
ISNFEFDRSPQDIALLRNISKVSAAAHMPFIGSVGPAFFGKHSMEEVAAIKDIGNYFDRA
EFIKWKAFRDSDDARYIGLLMPRVLGRLPYGPDTVPVRSFNYIESVKGPDHDKYLWTNAS
FAFAANMVKSFIANGWCVQIRGPQSGGAVTDLPIHLYDLGTGNQVKIPSEVMIPETREFE
FANLGFIPLSYYKNRDYACFFSANSTQKPALYDTPEATANSRINARLPYIFLLSRIAHYL
KLIQRENIGTTKDRRLLELELNKWVSGLVTEMNDPGDSLQASHPLRAGRVTVEDIEDNPG
FFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgaacattctcaagcgcaatcgcgtggcactacagtgttgcctgaagaaaac
caaggcgtatatggcgcgttgtttggcaagatcaatctcaacccggtaaaagtgctgggc
gaaatcgaagtgtttcaaagttccgaggcgctgtcggacgtttctgccgatgagcgagtg
actgccgctgtcagtgttttcttgaatttgatcaaacagtcttcgcgcaaagtccggcgt
ctggacaagacactgctggatgaacatattgcgtcgctggatgcacaaatcagtcgccaa
ctggacgccgtgatgcatcacccggatttccagagggtggagtccacctggcgcggtgtg
aaatcgttgatcgatcagaccgatttccgccagaacgtgcgcatcgaactgctcgatatc
agcaaggatcacctggtccaggatttcgaggatgcaccggagatcgcacaaagtggcctg
tatgtgcatacctacacccaggagtacgacaccccgggtggtgagccgatcgccgctgcc
atttccaacttcgagttcgaccgcagcccgcaggacattgccttgctgcgcaatatttcc
aaagtctcggcagccgcgcacatgcccttcatcggctccgtcggcccggccttttttggc
aagcactcgatggaagaagtcgccgccatcaaggacatcggcaactactttgaccgtgcc
gaattcatcaagtggaaagcgttccgcgacagtgatgatgcccgttacatcggcttgctc
atgcctcgagtattgggccgtctgccgtatggcccggacaccgttccggtgcgcagtttc
aactacatcgaaagcgtcaagggaccggaccacgacaaatacctgtggaccaacgcctcg
tttgcgttcgctgccaacatggtcaagagctttatcgccaacggctggtgcgtgcagatc
cgcggtccgcagtctggcggcgcggtcaccgacttgccgatccacttgtacgatctgggc
acaggcaatcaggtgaagatcccttcggaagtgatgattccggagacgcgcgagttcgag
ttcgccaacctcggcttcatcccgctctcgtactacaagaaccgtgactacgcgtgcttc
ttctcggccaactccacgcagaaaccggcgttgtacgataccccggaggccaccgccaat
agccggatcaatgcgcgcctgccctacatcttcctgctgtcacgcattgcccattacctg
aagctgatccagcgcgaaaacatcggcaccaccaaggatcgccgtttgttggagctggag
ttgaacaagtgggtcagcgggctggtcaccgagatgaacgatccgggcgactcgctgcag
gcttcgcacccgttgcgggctggccgggtcaccgtcgaagacatcgaggacaacccgggt
ttcttccgcgtcaagttgtatgccgtgccgcatttccaggtggaaggcatggacgtcaac
ctgtcgctggtttcgcagatgcccaaggcgaaagcctga
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