Pseudomonas azerbaijanorientalis: KSS91_17165
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Entry
KSS91_17165 CDS
T07706
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
paze
Pseudomonas azerbaijanorientalis
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paze03016
]
KSS91_17165 (thpR)
Enzymes [BR:
paze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KSS91_17165 (thpR)
Transfer RNA biogenesis [BR:
paze03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KSS91_17165 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
QXH59860
LinkDB
All DBs
Position
complement(3881320..3881859)
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AA seq
179 aa
AA seq
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MNDETREPIKRLFFALDCAPAQRREIAQWRSALQLRNGRPVPAENFHLTLKFLGAVGVAQ
IAELCTAAASIRTPGERLTVELDRLDVWRRAGALVLAPQQAPPALLRLVYALEQAMLPFG
LEQAPREYRPHLTLARDYRAPVPESPTAPQFFLHAERLTLFESHKGRYRALAEWPLIDP
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaaacccgcgagccgatcaagcgtctgttctttgcgctggactgcgccccg
gcccagcgccgggaaatcgcccaatggcgcagtgcgctgcagctgcgcaacggacgaccg
gtgccggcggagaactttcacctgacgttgaagtttttgggcgcggtgggtgtggcgcag
atcgccgagctctgcaccgcagcggcgtccatccgcacgccgggcgagcgcttgacggtg
gagcttgaccggctggacgtatggcgcagggcaggggcgttggtgctcgcaccacagcag
gcacccccggcattgctgcgtctggtctatgccctggaacaggcgatgttgccgttcggg
ctggagcaggccccaagggagtatcgcccgcacctgaccctggcgcgcgattatcgggca
ccggtgccggagtccccgaccgcgccgcaattcttcctgcatgccgagcgcctcaccctg
ttcgaatcccacaagggccgttatcgggcgctggccgaatggccgttgattgatccataa
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