Pseudomonas azerbaijanorientalis: KSS91_21425
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Entry
KSS91_21425 CDS
T07706
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
paze
Pseudomonas azerbaijanorientalis
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paze03009
]
KSS91_21425
Enzymes [BR:
paze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KSS91_21425
Ribosome biogenesis [BR:
paze03009
]
Prokaryotic type
rRNA helicases
KSS91_21425
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Microtub_bd
AAA_19
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
QXH60663
LinkDB
All DBs
Position
complement(4809848..4811188)
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AA seq
446 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKTPTKRKSANR
PKSDSLVSKDGMAPLKRRKPEAPAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccaacgcctgtgcaagccgcggccattccgctggcgctccaagggcgtgacctg
cgggtgacggcgcaaaccggtagcggcaaaaccgccgcattcgttttgcccatcctcaac
cgtctgataggcccggcgaaaatccgcgtcagcatcaagaccctgatcctgctgccaacc
cgcgaactggcccagcagacgctgaaggaagttgaacgcttctcgcagttcaccttcatc
aagtctggcctgatcaccggcggcgaagacttcaaggtccaggccgcgatgctgcgcaag
gtgccggacatcctgatcggtacgccgggccggatgatcgagcaactgaacgccggcaac
ctcgacttgaaagaagttgaagtcctggtgctcgacgaagccgaccgcatgctcgacatg
ggcttcgccgaagacgtgcagcgtctggtggacgaatgtaccaaccgtcagcagaccatg
ctgttctccgccaccaccggtggctcgggcctgcgcgagatgatcgccaaggtcctgaac
aaccctgagcacctgcagctcaacgcggtcagccagctgaacgacaccacccgccagcaa
atcattaccgctgaccacaaccagcacaaagaacagatcgtcaactggctgctggccaac
gagacctaccagaaggccatcgtcttcaccaacacccgggccatggccgaccgcatctac
ggccgcctggtggcgcaggaatacaaagcgttcgtgctgcacggcgagaaagaccagaag
gatcgcaaactggcgatcgaccgcctgaagcagggcggcgtgaaaatcctcgttgccacc
gacgtcgccgctcgcggcctggacgttgacggcctggacctggtgatcaacttcgacatg
ccgcgcagtggcgacgagtatgtgcaccgtatcggtcgtaccggccgcgccggtaacgat
ggcctggcaatctcgttgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagagcttcgagcgccgcaccatcaaggaagtcaaaggcacctacggcgga
ccgaagaaggtcaaggcctcgggcaaggctgtcggggtgaagaagaaaaagaccgacgcc
aagggcgacaagaagaaaactgccgccaagacaccgaccaagcgcaagagcgccaaccgg
ccgaagagcgattccctggtcagcaaggacggcatggcgccgctcaagcgccgcaagccg
gaagcgccagcggctgagtaa
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