Pseudomonas azerbaijanorientalis: KSS91_23145
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Entry
KSS91_23145 CDS
T07706
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
paze
Pseudomonas azerbaijanorientalis
Pathway
paze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KSS91_23145 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paze03400
]
KSS91_23145 (sbcB)
Enzymes [BR:
paze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
KSS91_23145 (sbcB)
DNA repair and recombination proteins [BR:
paze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KSS91_23145 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS91_23145 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSS91_23145 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QXH60982
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All DBs
Position
complement(5174963..5176393)
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AA seq
476 aa
AA seq
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MTSIFWYDYETTGINPRCDRPLQMAGLRTDFDLNEIDEPVNLYCQPSDDILPHPAACAIT
GITPGQLQAQGLSEADFMTRVHAQLAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRAAYALRPDGLQWPTDDEGRVTLKLERLTAANGIDHGNAHEALSDV
RATIALARLIREKQPKLYAWLFQLRSKQKVMDQIRLLQPLVHVSGRFSAARSYVGVVLPL
AWHPRNKNALIVCDLHLDPQGLLDLDAESLRQRLYTRHDELAEGELPVPLKLIHINKCPV
VAPLSVLRQDDQQRLGLDMALYQQRVLQLNDAREVWLDKVLAIYAREDFSQSQDPEQQLY
DGFIGDRDRRLCEQVRTVDPMQLAQEQWPFDDERLPELLFRYRARNFPDTLNAEEQERWR
IFCQKRLSDPGWGAPNTLESFVEAAAQLSVSATAFQQGVLGEWQDYVLGLRQRLHL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccatcttctggtacgactacgaaaccactggcatcaatccccgttgcgaccgt
ccgttgcaaatggccggcctgcgcaccgacttcgatctcaatgaaatcgacgagccggtc
aatctgtattgccaacccagcgacgacatcctgccgcacccggccgcttgtgcgatcacg
ggaatcacgcccgggcaactgcaggcgcagggcttgagcgaagccgatttcatgacacgg
gtgcatgcccagcttgcggcaccgggcacctgtggcgcggggtacaacacgctgcgtttc
gatgacgagatgacccgctacagcctgtaccgaaactttttcgacccttatgcgagggaa
tggcagggcggcaatagccgctgggacctgatcgatgtggtgcgcgccgcttatgccttg
cgccccgatggcctgcaatggccgacggacgacgaagggcgggtcacgctcaagcttgaa
cgcctgaccgcggccaacggcatcgatcatggcaatgcccacgaggcgctgtcggatgtt
cgcgcgacaattgccctggcgcgcctcattcgggaaaaacagccaaagctctacgcctgg
ctgtttcaactgcgcagcaagcaaaaagtcatggaccagatacgcctgctgcaaccgctg
gtgcatgtttccggacgcttttcggcggcgcgcagctatgtgggggtggtgttgcccctg
gcctggcacccacgcaacaagaacgccctgattgtctgtgacctgcacctggacccccag
ggcctgctcgacctggatgccgaaagtttgcgtcagcgcttgtatacccgccacgacgaa
ctggccgagggggagttgccagtgccgttgaagctgattcacatcaacaagtgcccggtg
gtggccccgttgtcggtacttcgccaggatgatcagcagcgcctggggctggacatggcg
ctgtatcaacagcgagtgctgcagctaaatgacgcgcgggaagtttggctggataaagtc
ttggcgatttatgcccgcgaagatttttctcagagccaggacccggagcaacagttatac
gatggattcatcggtgatcgggaccggcgtttgtgcgaacaagtcagaaccgttgacccg
atgcagttggcacaagagcagtggcctttcgatgacgaacgcttgcctgagttattattt
cgatatcgcgcacgcaactttcccgataccttgaatgccgaggagcaagagcgctggcga
atattctgtcagaagcgtttgtcagatcccggatggggggcgccaaataccctcgaaagt
tttgtagaggctgcagcccaattgagcgttagtgccactgcgtttcagcagggggtgctc
ggtgagtggcaggattatgtcctgggattgcgtcagcgtttgcatctttga
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