KEGG   Pseudomonas azotoformans: AYR47_00980
Entry
AYR47_00980       CDS       T04879                                 
Name
(GenBank) RNA-binding protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pazo  Pseudomonas azotoformans
Pathway
pazo02024  Quorum sensing
pazo03060  Protein export
pazo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AYR47_00980
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AYR47_00980
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AYR47_00980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pazo02044]
    AYR47_00980
Enzymes [BR:pazo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AYR47_00980
Secretion system [BR:pazo02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AYR47_00980
  Eukaryotic Sec-SRP protein
   AYR47_00980
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase AAA_33 cobW YqeC KTI12 ParA AAA_24 AAA_31 nSTAND3 Thymidylate_kin ABC_tran 6PF2K AAA_19 AAA_5 Mg_chelatase AAA_16 Helicase_RecD AAA_18 AAA_17 ATP_bind_1 NACHT
Other DBs
NCBI-ProteinID: AMN76985
UniProt: A0A127HR36
LinkDB
Position
complement(201105..202481)
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLEMLAGEVGVTFFPSDLSQKPVDIANAAIKEAK
LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEATLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKM
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaatctgactgaccgtctctcgcagacgctgcgccacgtcaccggcaaggcc
aagctgaccgaggacaatattaaagacaccctgcgcgaagtgcgcatggcgttgctggaa
gccgacgtcgccttgccggtggtgaaggacttcgtcaactcggtcaaagagcgcgcggta
ggcaccgaagtgtcccgcagcctgacaccgggccaggcgttcgtgaagatcgtccaggct
gagctcgaaagcctgatgggcgcggccaacgaagatttgaacctcagcgccgtgccaccg
gccgtggtgctgatggccggtctgcagggtgcgggtaagaccaccaccgctggcaagctg
gcgcgcttccttaaagagcgcaagaagaagtccgtgatggtggtgtcggctgacgtctac
cgtccggccgctatcaagcagctggaaatgctcgcgggcgaagtgggcgtgaccttcttc
ccgtccgacctgagccagaagccggtcgacatcgccaacgcggctattaaagaagccaag
ctcaaattcatcgacgtggtcatcgtcgataccgccggtcgcctgcacatcgacgaagag
atgatgggcgagatcaaggcgctgcatgccgcgatcaacccggtcgagacgctgttcgtg
gtcgacgccatgaccggtcaggatgcggccaacaccgccaaggcctttggtgatgcactg
ccactgaccggcgtgatcctgaccaaggtcgacggtgacgcccgtggcggtgccgcgctg
tcggtacgtgccatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgaa
gcgctcgaacccttccatcctgagcgtatcgcctcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgaacaggccgaagccaccctcgacaaggacaaggccgataaactggcc
aagaaactgaagaagggcaagggcttcgacctcgaagatttccgcgaccagctgcaacag
atgaagaacatgggcggcctcggcggcctgatggacaagctgccgaacatcggcggtgtg
aacctggcgcagatgggcaatgcccagggtgcggcagagaagcagttcaagcagatggaa
gccatcatcaattccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaaacgtcggatcgccatgggttccggcacccaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaaattctccgccaaaggcggaatggcc
aagatgatgcgcggcatgggcggtatgttgcccggcggcggtatgcccaaaatgtaa

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